Job Description P16692 Confidence 99.65% Date Thu Jan 5 11:35:43 GMT 2012 Rank 40 Aligned Residues 194 % Identity 9% Template c2q9uB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:a-type flavoprotein; PDBTitle: crystal structure of the flavodiiron protein from giardia2 intestinalis Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.										.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.
Query Sequence		Q	P	C	S	G	V	V	K	F	N	D	A	I	T	L	I	D	A	G	L	H	.	.	.	.	.	.	.	.	.	D	L	A	D	R	W	S	P	G	S	F	Q	Q	F	L	L	T	H	Y	H	M	D	H	V	Q	G	L	F	P	L	R	W	G	V	G	D	P	I	P	V	Y	G	P	P	D	E	Q	G	C	D
Query Conservation																							.	.	.	.	.	.	.	.	.
Alig confidence										.													.	.	.	.	.	.	.	.	.					.																																.
Template Conservation										.																										.																																.
Template Sequence		S	Y	N	S	Y	F	I	D	.	D	E	C	P	T	V	I	D	S	V	K	Y	P	F	A	E	E	W	L	S	R	I	A	A	C	.	C	P	L	D	K	I	K	Y	V	V	M	N	H	A	E	G	D	H	A	S	S	L	K	D	H	Y	H	K	F	T	N	.	A	T	F	V	C	T	K	K	C	Q	E	H	L
Template Known Secondary structure										.	S	S	S									G	G	G												.	S		G	G	G							S								T	T					G	G	G		T	T	.
Template Predicted Secondary structure										.																										.																																.
Template SS confidence
		40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		D	L	F	K	H	P	G	L	L	D	F	S	H	T	V	E	P	F	V	V	F	D	L	Q	G	L	Q	V	T	P	L	P	L	N	H	S	K	L	T	F	G	Y	L	L	E	T	A	H	S	R	V	A	W	L	S	D	T	.	A	G	L	P	E	K	T	L	K	F	L	R	N	N	Q	P	Q	V	M	V	M	D
Query Conservation																																																											.
Alig confidence													.																																														.
Template Conservation													.
Template Sequence		K	I	L	Y	G	M	E	K	A	T	W	.	L	I	V	D	D	K	Y	T	L	K	I	G	K	R	T	L	K	F	I	P	V	P	L	L	H	W	P	D	S	T	F	T	Y	C	P	E	D	K	I	L	F	S	N	D	G	F	G	Q	H	Y	A	T	S	R	R	W	A	D	E	C	D	V	S	H	V	M	H	L
Template Known Secondary structure								T	T				.					T	T						S	S									T	T	S	S	S	T	T							T	T	T	T						T	T	T							S			B	G	G	G	S
Template Predicted Secondary structure													.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	H	P	P	R	A	D	A	P	R	N	H	C	D	L	N	T	V	L	A	L	N	Q	V	I	R	S	P	R	V	I	L	T	H	I	S	H	Q	F	D	A	W	L	M	E	N	A	L
Query Conservation
Alig confidence																																					.
Template Conservation																																					.
Template Sequence		F	K	E	Y	T	A	N	I	L	G	L	F	S	A	Q	M	R	K	A	L	E	V	A	S	T	V	E	I	K	Y	I	L	S	A	H	.	G	V	S	W	R	G	D	A	M	G	L	A	I
Template Known Secondary structure										T	T	T													T	T	S			S					S	S	.	S		B
Template Predicted Secondary structure																																					.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions