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Job DescriptionP16692
Confidence99.24%DateThu Jan 5 11:35:43 GMT 2012
Rank75Aligned Residues182
% Identity13%Templatec2cfuA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:sdsa1; PDBTitle: crystal structure of sdsa1, an alkylsulfatase from2 pseudomonas aeruginosa, in complex with 1-decane-sulfonic-3 acid.
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50........ .60.........70.........80.........90 .........100......
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Query Sequence  PCSGVVKFNDAITLIDAGLH. . . . . . . . . DLADRWSPGSFQQFLLTHYHMDHVQGLFPLRW. . . GVGDPIPVYGPPDEQG
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Template Sequence  ANITFIRGDSGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPAGFME
Template Known Secondary structure  S

SSS


SS




SBS
TTGGGT

TTSSTT
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   123......130.........140.........150.........160.........170.........180.........190.........200..
 
   107..110..... ....120.........130.........140.........150
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Query Sequence  CDDLFKHPG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LLDFSHTVEPFVVFDLQGLQVTPLPLNHSKLTFGY
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Template Sequence  AAIVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGEGEDLVLDGVPFTFQNTPGTESPAEM
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TTTTTTS
BSTTSB


SSSS



S






S
TTTT
TTSSSSSB
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   203......210.........220.........230.........240.........250.........260.........270.........280..
 
   151........160.........170.........180.........190.........200.........210... ......220.......
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Query Sequence  LLETAHSRVAWLSDTAGLPEKTLKFLRNNQPQVMVMDCSHPPRADAPRNHCDLNTVLALNQVI. . . RSPRVILTHISHQF
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Template Sequence  NIWLPRQKALLMAENVV. . . . . . . . . . . . . . . . GTLHNLYTLRGAEVRDALGWSKYINQALHRFGRQAEVMFAVHNWPRW
Template Known Secondary structure  TTTT
TTTS
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SS
TT





TGGG
S
SSS

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   286...290.........300.. .......310.........320.........330.........340.........
 
   228.230......
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Query Sequence  DAWLMENAL
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Template Sequence  GNAEIVEVL
Template Known Secondary structure  S
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   350........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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