Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB28
Confidence2.50%DateThu Jan 5 11:14:28 GMT 2012
Rank83Aligned Residues14
% Identity29%Templatec3hcsA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:tnf receptor-associated factor 6; PDBTitle: crystal structure of the n-terminal domain of traf6
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80....
Predicted Secondary structure 





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Query Sequence  LECQRCGKPFTHQV
Query Conservation 
 
 


 
    
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Template Conservation 
 
 

      
 
Template Sequence  YECPICLMALREAV
Template Known Secondary structure  GB
TTT
SB
SS
Template Predicted Secondary structure 





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   68.70.........80.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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