Return to main results Retrieve Phyre Job Id

Job DescriptionP76633
Confidence100.00%DateThu Jan 5 12:25:09 GMT 2012
Rank14Aligned Residues247
% Identity16%Templated2pd4a1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20........ .30.........40.........50.........60.........70.........80.........90..
Predicted Secondary structure 








..




















Query SS confidence 













. .































































Query Sequence  SLKGKTAIVTGGNS. . GLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERF
Query Conservation   
 

 






 ..


 
 
  
   

 

   
                       
                  
Alig confidence 













..































































Template Conservation   
 

 







  


 
 
  

  

 
 
  
                       
                  
Template Sequence  FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL
Template Known Secondary structure  TTTT



STTSTTT
SSTTTTT




TT
T
Template Predicted Secondary structure 

































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   93......100.........110.........120.........130.........140.. .......150.........160.........170
Predicted Secondary structure 






































..












Query SS confidence 

















































. .



























Query Sequence  GTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIP. . QKSGKIINICSLFSYLGGQWSPAYSATK
Query Conservation                                                    ..         

            
  

Alig confidence 

















































..



























Template Conservation        
  

                                               
  

            
 


Template Sequence  GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAK
Template Known Secondary structure  S






GGGGSS
GGG

TGGG
GGGTS

TT
Template Predicted Secondary structure 
















































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   171........180.........190.........200.........210.........220.........230.........240.........250
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  HALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGH
Query Conservation   
   
    
 
     
 

 
 

 
 
                    

 
   




  
  
 
     


 
Alig confidence 















































































Template Conservation   
        
       
 

 
 

 
 
                    

 
   




  
 

 
  
  


 
Template Sequence  AALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGE
Template Known Secondary structure  TTT





TTGGGSTTSTTSS


SGGGTT

S
Template Predicted Secondary structure 



































Template SS confidence 















































































   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   251........260.
Predicted Secondary structure 




Query SS confidence 










Query Sequence  LLVVDGGYLVR
Query Conservation   
 



   
Alig confidence 










Template Conservation   
 



    
Template Sequence  VHFVDAGYHVM
Template Known Secondary structure  STTGGG
Template Predicted Secondary structure 




Template SS confidence 










   243......250...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions