Return to main results Retrieve Phyre Job Id

Job DescriptionP76633
Confidence100.00%DateThu Jan 5 12:25:09 GMT 2012
Rank53Aligned Residues244
% Identity23%Templated1ja9a_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.... .....60.........70.........80.........90..
Predicted Secondary structure 















..













Query SS confidence 







































. .





































Query Sequence  SLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDN. . GETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERF
Query Conservation   
 

 






 


 
 
  
   

 

   
    ..                   
                  
Alig confidence 







































..





































Template Conservation   
 

  





 


 
 
  
   

 


                            
                  
Template Sequence  PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF
Template Known Secondary structure  TTTT
TTTTSTT
SS
TT



TTS
Template Predicted Secondary structure 










































Template SS confidence 















































































   26...30.........40.........50.........60.........70.........80.........90.........100.....
 
   93......100.........110.........120.........130.........140.........150.........160.........170..
Predicted Secondary structure 



















































Query SS confidence 















































































Query Sequence  GTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHA
Query Conservation                                                             

            
  

 
Alig confidence 


















































.



























Template Conservation                                                     .                     
  

  
Template Sequence  GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG. GRIILTSSIAAVMTGIPNHALYAGSKAA
Template Known Secondary structure  S










GGG

T.

GGGT

S

S
Template Predicted Secondary structure 






































.















Template SS confidence 















































































   106...110.........120.........130.........140.........150...... ...160.........170.........180....
 
   173......180.........190.........200.........210 .........220.........230.........240.
Predicted Secondary structure 
















...........









Query SS confidence 





































. . . . . . . . . . .






























Query Sequence  LAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSN. . . . . . . . . . . PETNQRVLDHIPANRWGDTQDLMGAAVFLAS
Query Conservation     
    
 
     
 

 
 

 
 
         ...........           

 
   




  
  
 
Alig confidence 





































...........






























Template Conservation          
 
     
 

 
 

 
 
                               



   




  
 

 
Template Sequence  VEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQ
Template Known Secondary structure  GGGT


BSSGGGTSTT

TT

TSTTSS
B
S
Template Predicted Secondary structure 
































Template SS confidence 















































































   185....190.........200.........210.........220.........230.........240.........250.........260....
 
   242.......250.........
Predicted Secondary structure 








Query SS confidence 

















Query Sequence  PASNYVNGHLLVVDGGYL
Query Conservation       


  
 



  
Alig confidence 

















Template Conservation    
  


  
 



  
Template Sequence  EESEWINGQVIKLTGGGI
Template Known Secondary structure  GGGTT

S
STT

Template Predicted Secondary structure 










Template SS confidence 

















   265....270.........280..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions