Return to main results Retrieve Phyre Job Id

Job DescriptionP76633
Confidence100.00%DateThu Jan 5 12:25:09 GMT 2012
Rank107Aligned Residues232
% Identity25%Templatec3un1D_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:probable oxidoreductase; PDBTitle: crystal structure of an oxidoreductase from sinorhizobium meliloti2 1021
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  SLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERFGT
Query Conservation   
 

 






 


 
 
  
   

 

   
                       
                    
Alig confidence 









































........





























Template Conservation 
   
 






 


 


  
   
  
    
      ........                              
Template Sequence  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA. . . . . . . . DPDIHTVAGDISKPETADRIVREGIERFGR
Template Known Secondary structure 

SSSS
SSTTSS



S........
TT

TTSS
Template Predicted Secondary structure 














........











Template SS confidence 















































































   1........10.........20.........30.........40.. .......50.........60.........70..
 
   95....100.........110.........120.........130.........140.........150.........160.. .......170..
Predicted Secondary structure 
















































..
Query SS confidence 



































































. .









Query Sequence  VDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQW. . SPAYSATKHA
Query Conservation                                                           

         ..   
  

 
Alig confidence 



































































..









Template Conservation                                                        
   
                 

  
Template Sequence  IDSLVNNAGVFLAKPFVEXTQEDYDHNLGVNVAGFFHITQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALASLTKGG
Template Known Secondary structure 










GGG

TTT


TTTTS

TT


Template Predicted Secondary structure 
























































Template SS confidence 















































































   73......80.........90.........100.........110.........120.........130.........140.........150..
 
   173......180.........190.........200.........210.........220.........230.........240.........250..
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  LAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLL
Query Conservation     
    
 
     
 

 
 

 
 
                    

 
   




  
  
 
     


  
Alig confidence 































.....





























..










Template Conservation          
       



 
 

 
 
   .....            
  
   
 


  
  
..  
  


  
Template Sequence  LNAVTRSLAXEFSRSGVRVNAVSPGVIKTPXH. . . . . PAETHSTLAGLHPVGRXGEIRDVVDAVLYL. . EHAGFITGEIL
Template Known Secondary structure  TTTTT

B

TTS.....
GGGTTSTTS

B
..
TT

S
Template Predicted Secondary structure 



















.....









..






Template SS confidence 















































































   153......160.........170.........180.... .....190.........200.........210.... .....220.....
 
   253......260.
Predicted Secondary structure 




Query SS confidence 








Query Sequence  VVDGGYLVR
Query Conservation   



   
Alig confidence 








Template Conservation   



    
Template Sequence  HVDGGQNAG
Template Known Secondary structure  STTGGG
Template Predicted Secondary structure 






Template SS confidence 








   226...230....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions