Job Description P76633 Confidence 99.95% Date Thu Jan 5 12:25:09 GMT 2012 Rank 190 Aligned Residues 241 % Identity 18% Template c3rd5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:mypaa.01249.c; PDBTitle: crystal structure of a putative uncharacterized protein from2 mycobacterium paratuberculosis Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		D	F	F	S	L	K	G	K	T	A	I	V	T	G	G	N	S	G	L	G	Q	A	F	A	M	A	L	A	K	A	G	A	N	I	F	I	P	S	F	V	K	D	N	G	E	.	T	K	E	M	I	E	K	Q	G	V	E	V	D	F	M	Q	V	G	I	T	A	E	G	A	P	Q	K	I	I	A	A	C	C	E
Query Conservation																																															.
Alig confidence																																															.
Template Conservation
Template Sequence		D	L	P	S	F	A	Q	R	T	V	V	I	T	G	A	N	S	G	L	G	A	V	T	A	R	E	L	A	R	R	G	A	T	V	I	M	A	V	R	D	T	R	K	G	E	A	A	A	R	T	M	A	G	Q	V	E	V	R	E	L	D	L	Q	D	L	S	S	V	R	R	F	A	D	G	V	S	G	A	D	V
Template Known Secondary structure		G					T	T									S	S													T	T								S										T	T	S	S	S									T	T											T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	G	T	V	D	I	L	V	N	N	A	G	I	C	K	L	N	K	V	L	D	F	G	R	A	D	W	D	P	M	I	D	V	N	L	T	A	A	F	E	L	S	Y	E	A	A	K	I	M	I	P	Q	K	S	G	K	I	I	N	I	C	S	L	F	S	Y	L	G	G	Q	W	S	P	A	Y	S	A	T	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	N	N	A	G	I	M	A	V	P	Y	A	L	T	V	D	G	F	E	S	Q	I	G	T	N	H	L	G	H	F	A	L	T	N	L	L	L	P	R	L	T	D	R	V	V	T	V	S	S	M	A	H	W	P	G	R	I	N	L	E	D	L	N	W	R	S	R	R	Y	S	P	W	L	A	Y	S	Q	S	K
Template Known Secondary structure										S					B		T	T	S		B							T											G	G	G											G	G	G	T	T					S	S		T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.																			220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																					.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	A	L	A	G	F	T	K	A	Y	C	D	E	L	G	Q	Y	N	I	.	.	Q	V	N	G	I	A	P	G	Y	Y	A	T	D	I	T	L	A	T	R	S	N	P	E	T	N	Q	R	V	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	P	A	N	R	W	G	D	T	Q
Query Conservation																					.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	N	L	L	F	T	S	E	L	Q	R	R	L	T	A	A	G	S	P	L	R	A	L	A	A	H	P	G	Y	S	H	T	N	L	A	T	D	A	D	F	G	A	R	Q	T	L	Y	A	A	S	Q	D	L	P	G	D	S	F	V	G	P	R	F	G	Y	L	G	R	T	Q	P	V	G	R	S	R	R	A	K
Template Known Secondary structure																		T	T											S	G	G	G	S																			S				T	T						T	T	S	S	S	S									T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	M	G	A	A	V	F	L	A	S	P	A	S	N	Y	V	N	G	H	L	L	V	V
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		D	A	G	M	A	A	A	L	W	.	.	A	L	S	E	Q	L	T	K	T	E	F	P	L
Template Known Secondary structure											.	.								T
Template Predicted Secondary structure											.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions