Job Description P76633 Confidence 99.95% Date Thu Jan 5 12:25:09 GMT 2012 Rank 188 Aligned Residues 210 % Identity 15% Template c3h7aC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of short-chain dehydrogenase from2 rhodopseudomonas palustris Resolution 1.87 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	K	T	A	I	V	T	G	G	N	S	G	L	G	Q	A	F	A	M	A	L	A	K	A	G	A	N	I	F	I	P	S	F	V	K	D	N	G	E	T	K	E	M	I	E	K	Q	G	V	E	V	D	F	M	Q	V	G	I	T	A	E	G	A	P	Q	K	I	I	A	A	C	C	E	R	F	G	T	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	A	T	V	A	V	I	G	A	G	D	Y	I	G	A	E	I	A	K	K	F	A	A	E	G	F	T	V	F	A	G	R	R	N	G	E	K	L	A	P	L	V	A	E	I	E	A	A	G	G	R	I	V	A	R	S	L	D	A	R	N	E	D	E	V	T	A	F	L	N	A	A	D	A	H	A	P	L	E
Template Known Secondary structure												S	S													T	T								S	S	G	G	G	G										T	T										T	T																S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	V	N	N	A	G	I	C	K	L	N	K	V	L	D	F	G	R	A	D	W	D	P	M	I	D	V	N	L	T	A	A	F	E	L	S	Y	E	A	A	K	I	M	I	P	Q	K	S	G	K	I	I	N	I	C	S	L	F	S	Y	L	G	G	Q	W	S	P	A	Y	S	A	T	K	H	A	L	A	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	I	F	N	V	G	A	N	V	N	F	P	I	L	E	T	T	D	R	V	F	R	K	V	W	E	M	A	C	W	A	G	F	V	S	G	R	E	S	A	R	L	M	L	A	H	G	Q	G	K	I	F	F	T	G	A	T	A	S	L	R	G	G	S	G	F	A	A	F	A	S	A	K	F	G	L	R	A	V
Template Known Secondary structure															G	G	G														T																	T	T										G	G	G	T				T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		T	K	A	Y	C	D	E	L	G	Q	Y	N	I	Q	V	N	G	I	A	P	G	Y	Y	A	T	D	I	T	L	A	T	R	S	N	P	E	T	.	N	Q	R	V	L	D	H	I	P	A	N	R	W
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		A	Q	S	M	A	R	E	L	M	P	K	N	I	H	V	A	H	L	I	I	D	M	P	P	A	A	V	A	G	A	Y	W	Q	L	Y	Q	Q	P	K	S	A	W	T	F	E	M	E	I	R	P	Y
Template Known Secondary structure										G	G	G	T																											G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions