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Job DescriptionP76633
Confidence100.00%DateThu Jan 5 12:25:09 GMT 2012
Rank57Aligned Residues238
% Identity33%Templatec3ftpD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:3-oxoacyl-[acyl-carrier protein] reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein)2 reductase from burkholderia pseudomallei at 2.05 a3 resolution
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50...... ...60.........70.........80.........90..
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Query Sequence  FSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGE. TKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERF
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Template Sequence  KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF
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TTTT
S
SSTT
SST




TT
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   93......100.........110.........120.........130.........140.........150.........160.........170..
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Query Sequence  GTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHA
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Template Sequence  GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAG
Template Known Secondary structure  S











GGG

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T

TT
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   173......180.........190.........200.........210.........220.........230.........240.........250..
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Query Sequence  LAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLL
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Template Sequence  VAGMTRALAREIGSRGITVNCVAPGFIDTDEQQ. . . . . . . . . TALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTL
Template Known Secondary structure  GGGT

SB




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TT
S
B
SGGGTT

S
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   163......170.........180.........190..... ....200.........210.........220.........230...
 
   253......260
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Query Sequence  VVDGGYLV
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Template Sequence  HVNGGMFM
Template Known Secondary structure  STTSS
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   241.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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