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Job DescriptionP76633
Confidence100.00%DateThu Jan 5 12:25:09 GMT 2012
Rank105Aligned Residues228
% Identity25%Templatec3f9iB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase2 rickettsia prowazekii
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........90..
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Query Sequence  FFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERF
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Template Sequence  MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISK. . . . . . .
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TT
TTTTSTT
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   1........10.........20.........30.........40.........50.........60.........70...
 
   93......100.........110.........120.........130.........140.........150.........160.........170..
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Query Sequence  GTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHA
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Template Sequence  . . . . . . . . . . . TSNLDILVCNAGITDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIGNPGQANYCASKAG
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   74.....80.........90.........100.........110.........120.........130.........140..
 
   173......180.........190.........200.........210.........220.........230.........240.........250..
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Query Sequence  LAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLL
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Template Sequence  LIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL. . NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTL
Template Known Secondary structure  GGGT
SB

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S
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T
TTSS
B
SGGGTT

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   155....160.........170.........180......... 190.........200.........210.........220.........230..
 
   253......260
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Query Sequence  VVDGGYLV
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Template Sequence  HVNGGMLM
Template Known Secondary structure  STTSS
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   233......240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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