Job Description P76633 Confidence 98.89% Date Thu Jan 5 12:25:09 GMT 2012 Rank 234 Aligned Residues 231 % Identity 14% Template c3enkB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:udp-glucose 4-epimerase; PDBTitle: 1.9a crystal structure of udp-glucose 4-epimerase from2 burkholderia pseudomallei Resolution 1.90 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		K	G	K	T	A	I	V	T	G	G	N	S	G	L	G	Q	A	F	A	M	A	L	A	K	A	G	A	N	I	F	I	P	S	F	V	K	D	N	G	E	.	.	T	K	E	M	I	E	K	Q	G	V	E	V	D	F	M	Q	V	G	I	T	A	E	G	A	P	Q	K	I	I	A	A	C	C	E	R	F	G	T
Query Conservation																																										.	.
Alig confidence																																										.	.
Template Conservation
Template Sequence		T	K	G	T	I	L	V	T	G	G	A	G	Y	I	G	S	H	T	A	V	E	L	L	A	H	G	Y	D	V	V	I	A	D	N	L	V	N	S	K	R	E	A	I	A	R	I	E	K	I	T	G	K	T	P	A	F	H	E	T	D	V	S	D	E	R	A	L	A	R	I	F	D	A	H	P	I	T	A	A	I
Template Known Secondary structure		S	S							T	T	T	S													T	T										S	S	S		T											S										T	T												S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.													160	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	I	L	V	N	N	A	G	I	C	K	L	N	K	V	L	D	F	G	R	A	D	W	D	P	M	I	D	V	N	L	T	A	A	F	E	L	S	Y	E	A	A	K	I	M	I	P	Q	K	S	G	K	I	I	N	I	C	S	L	F	S	Y	L	G	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	W
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	F	A	A	L	K	A	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	V	A	K	P	I	E	Y	Y	R	N	N	L	D	S	L	L	S	L	L	R	V	M	R	E	R	A	V	K	R	I	V	F	S	S	S	A	T	V	Y	G	V	P	E	R	S	P	I	D	E	T	F	P	L	S	A	T
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.																											T	T										G	G	G	B		S		S	S	S	S	B		T	T	S			B		S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.														.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																															.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	A	Y	S	A	T	K	H	A	L	A	G	F	T	K	A	Y	C	D	E	L	G	Q	Y	N	I	Q	V	.	.	.	N	G	I	A	P	G	Y	Y	A	T	D	I	T	L	A	T	R	S	N	P	E	T	N	Q	R	V	L	D	H	I	P	A	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																															.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	P	Y	G	Q	T	K	L	M	A	E	Q	I	L	R	D	V	E	A	A	D	P	S	W	R	V	A	T	L	R	Y	F	N	P	V	G	A	H	E	S	G	L	I	G	E	D	P	A	G	I	P	N	N	L	M	P	Y	V	A	Q	V	A	V	G	K	L	E	K	L	R	V	F	G	S	D	Y	P	T	P	D
Template Known Secondary structure		S																					T	T																T	T	S	S	S					S	S	S		S	S											T	S	S	S							S		S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
								226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	W	G	D	T	Q	D	L	M	G	A	A	V	F	L	A	S	P	A	S	N	Y	V	N	G	H	L	L	V	V	D	G	G	Y	L	V
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	G	V	R	D	Y	I	H	V	V	D	L	A	R	G	H	I	A	A	L	D	A	L	E	R	R	D	A	S	L	T	V	N	L	G	T	G	R	G	Y
Template Known Secondary structure		S	S																									T	T	S							S		S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions