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Job DescriptionP76633
Confidence99.06%DateThu Jan 5 12:25:09 GMT 2012
Rank227Aligned Residues197
% Identity10%Templatec3dhnA_
PDB info PDB header:isomerase, lyaseChain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: crystal structure of the putative epimerase q89z24_bactn2 from bacteroides thetaiotaomicron. northeast structural3 genomics consortium target btr310.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70.........80.........90........
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Query Sequence  KTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERFGTVDIL
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Template Sequence  KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI. . . . . . KIENEHLKVKKADVSSLDEVCEVCKGADAV. . . . . . .
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T

TTT

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   5....10.........20.........30.........40. ........50.........60.........70.
 
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Query Sequence  VNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFS. . . . . . . . . . YLGGQWSPAYSA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . ISAFNPIYDETIKVYLTIIDGVKKAGVNRFLXVGGAGSLFIAPGLRLXDSGEVPENILPG
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STT
S

STTSTTGGGTT
S
GGG
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   72.......80.........90.........100.........110.........120.........130.
 
   169170.........180.........190.........200.........210.........220.........230.........240........
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Query Sequence  TKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVN
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Template Sequence  VKALGEFYLNFL. . . XKEKEIDWVFFSPAADXRPGVRTGRYRLGKDDXIVDIVG. NSHISVEDYAAAXIDEL. . EHPKHH
Template Known Secondary structure  TG...GG

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   138.140......... 150.........160.........170.........180........ .190.........200..... ....210.
 
   249250....
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Query Sequence  GHLLVV
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Template Sequence  QERFTI
Template Known Secondary structure  S
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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