Job Description P76633 Confidence 99.94% Date Thu Jan 5 12:25:09 GMT 2012 Rank 191 Aligned Residues 198 % Identity 16% Template c3d7lG_ PDB info PDB header:structural genomics, unknown function Chain: G: PDB Molecule:lin1944 protein; PDBTitle: the crystal structure of the protein lin1944 from listeria innocua . Resolution 2.06 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	A	I	V	T	G	G	N	S	G	L	G	Q	A	F	A	M	A	L	A	K	A	G	A	N	I	F	I	P	S	F	V	K	D	N	G	E	T	K	E	M	I	E	K	Q	G	V	E	V	D	F	M	Q	V	G	I	T	A	E	G	A	P	Q	K	I	I	A	A	C	C	E	R	F	G	T	V	D	I	L
Query Conservation
Alig confidence																										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	K	I	L	L	I	G	A	S	G	T	L	G	S	A	V	K	E	R	L	E	K	K	A	.	E	V	I	T	A	G	R	H	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	T	V	D	I	T	N	I	D	S	I	K	K	X	Y	E	Q	V	G	K	V	D	A	I
Template Known Secondary structure								T	T	T	S											T	T	T	S	.							S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S					T	T
Template Predicted Secondary structure																										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.																					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	N	A	G	I	C	K	L	N	K	V	L	D	F	G	R	A	D	W	D	P	M	I	D	V	N	L	T	A	A	F	E	L	S	Y	E	A	A	K	I	M	I	P	Q	K	S	G	K	I	I	N	I	C	S	L	F	S	Y	L	G	G	Q	W	S	P	A	Y	S	A	T	K	H	A	L	A	G	F	T	K
Query Conservation
Alig confidence																																												.	.
Template Conservation																																												.	.
Template Sequence		V	S	A	T	G	S	A	T	F	S	P	L	T	E	L	T	P	E	K	N	A	V	T	I	S	S	K	L	G	G	Q	I	N	L	V	L	L	G	I	D	S	L	.	.	N	D	K	G	S	F	T	L	T	T	G	I	X	X	E	D	P	I	V	Q	G	A	S	A	A	X	A	N	G	A	V	T	A	F	A	K
Template Known Secondary structure													G	G	G												T	T	T									T	T	G	G	G		.	.												G	G	G	T	S			T	T
Template Predicted Secondary structure																																												.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	C	D	E	L	G	Q	Y	N	I	Q	V	N	G	I	A	P	G	Y	Y	A	T	D	I	T	L	A	T	R	S	N	P	E	T	N	Q	R	V	L	D	H	I	P	A	N	R	W	G	D	T	Q	D	L	M	G	A	A	V	F	L	A	S	P	A	S	N	Y	V	N	G	H	L	L	V	V
Query Conservation
Alig confidence											.																.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation											.																.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Sequence		S	A	A	I	E	X	P	R	G	.	I	R	I	N	T	V	S	P	N	V	L	E	E	S	W	.	.	.	.	.	.	.	.	.	.	.	D	K	L	E	P	F	F	E	G	F	L	P	V	P	A	A	K	V	A	R	A	F	E	K	S	V	.	.	.	F	G	A	Q	T	G	E	S	Y	Q	V
Template Known Secondary structure				G	G	G		S	T	T	.											B	G	G	G		.	.	.	.	.	.	.	.	.	.	.				G	G	G	S	T	T				B														.	.	.		S				S
Template Predicted Secondary structure											.																.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.												.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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