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Job DescriptionP76633
Confidence100.00%DateThu Jan 5 12:25:09 GMT 2012
Rank41Aligned Residues246
% Identity29%Templatec3ak4C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:nadh-dependent quinuclidinone reductase; PDBTitle: crystal structure of nadh-dependent quinuclidinone reductase from2 agrobacterium tumefaciens
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........90..
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Query Sequence  FFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERF
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Template Sequence  IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVV. . AGLENGGFAVEVDVTKRASVDAAMQKAIDAL
Template Known Secondary structure  TT

TT
TTTSTT
S
..T
TT


TT
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   4.....10.........20.........30.........40.........50 .........60.........70.........80.
 
   93......100.........110.........120.........130.........140 .........150.........160.........170.
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Query Sequence  GTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIM. IPQKSGKIINICSLFSYLGGQWSPAYSATKH
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Template Sequence  GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKF
Template Known Secondary structure  TS










GGG

TT




GGGTS

TT
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   172.......180.........190.........200.........210 .........220.........230.........240..
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Query Sequence  ALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSN. . . . . . . . . PETNQRVLDHIPANRWGDTQDLMGAAVFLASP
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Template Sequence  AVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASD
Template Known Secondary structure  GGGT

SB
ST

T
TT
S
B
SG
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   243......250.........260
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Query Sequence  ASNYVNGHLLVVDGGYLV
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Template Sequence  AARFMTGQGINVTGGVRM
Template Known Secondary structure  GGTT

S
SSSSS
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   242.......250.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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