Return to main results Retrieve Phyre Job Id

Job DescriptionP76633
Confidence98.42%DateThu Jan 5 12:25:09 GMT 2012
Rank268Aligned Residues228
% Identity11%Templatec3a1nB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:ndp-sugar epimerase; PDBTitle: crystal structure of l-threonine dehydrogenase from2 hyperthermophilic archaeon thermoplasma volcanium
Resolution2.07 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60.........70.........80.........90.........
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  TAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERFGTVDILV
Query Conservation   






 


 
 
  
   

 

   
                       
                         
Alig confidence 




































........























.....





Template Conservation   










  

  
   
  
    
      ........   
     

 
           .....      
Template Sequence  MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRD. . . . . . . . TGGIKFITLDVSNRDEIDRAVEKY. . . . . SIDAIF
Template Known Secondary structure 
TTTS
GGGSS


........
TT



TT
T.....T

Template Predicted Secondary structure 














........








.....





Template SS confidence 















































































   1........10.........20.........30....... ..40.........50.........60. ......
 
   100.........110.........120.........130.........140.........150.........160.........170.........
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  NNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKA
Query Conservation                                                      

            
  

 
   
   
Alig confidence 















































































Template Conservation    
                                                                             
Template Sequence  HLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMYGVTKIAAELL
Template Known Secondary structure 





TT

GGG

TTS
SSSB
SSS




S
Template Predicted Secondary structure 




















































Template SS confidence 















































































   68.70.........80.........90.........100.........110.........120.........130.........140.......
 
   180.........190.........200.........210......... 220.........230.........240......
Predicted Secondary structure 
















.............











Query SS confidence 







































. . . . . . . . . . . . .


























Query Sequence  YCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLD. . . . . . . . . . . . . HIPANRWGDTQDLMGAAVFLASPASNY
Query Conservation   
 
     
 

 
 

 
 
                  .............  

 
   




  
  
 
     
Alig confidence 







































.............


























Template Conservation                       
                                        
 

  
    
      
Template Sequence  GQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDK
Template Known Secondary structure 



SSS




TTTTT
SS
TT

S
TTT
Template Predicted Secondary structure 









































Template SS confidence 















































































   148.150.........160.........170.........180.........190.........200.........210.........220.......
 
   247..250.........260
Predicted Secondary structure 







Query SS confidence 













Query Sequence  VNGHLLVVDGGYLV
Query Conservation 


  
 



   
Alig confidence 













Template Conservation                
Template Sequence  LVLRNGYNVTAYTF
Template Known Secondary structure 
SS


S
Template Predicted Secondary structure 











Template SS confidence 













   228.230.........240.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions