Return to main results Retrieve Phyre Job Id

Job DescriptionP76633
Confidence100.00%DateThu Jan 5 12:25:09 GMT 2012
Rank6Aligned Residues246
% Identity34%Templatec2q2qG_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:beta-d-hydroxybutyrate dehydrogenase; PDBTitle: structure of d-3-hydroxybutyrate dehydrogenase from pseudomonas putida
Resolution2.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  SLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERFGT
Query Conservation   
 

 






 


 
 
  
   

 

   
                       
                    
Alig confidence 






































.







































Template Conservation 

 









 


 


  
   
  

   
   .                   
                    
Template Sequence  TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP. APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGG
Template Known Secondary structure 

TT
TT
SSTT

SS

.TTT




TTSSS
Template Predicted Secondary structure 














.
























Template SS confidence 















































































   2.......10.........20.........30.........40 .........50.........60.........70.........80
 
   95....100.........110.........120.........130.........140.........150.........160.........170....
Predicted Secondary structure 

















































Query SS confidence 















































































Query Sequence  VDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALA
Query Conservation                                                           

            
  

 
  
Alig confidence 















































































Template Conservation                                                            
            
  

 
  
Template Sequence  VDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVV
Template Known Secondary structure 
S








TTS

TTT


GGGTS

TT
Template Predicted Secondary structure 
























































Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   175....180.........190.........200....... ..210.........220.........230.........240.........
Predicted Secondary structure 













.....

















Query SS confidence 
































. . . . .









































Query Sequence  GFTKAYCDELGQYNIQVNGIAPGYYATDITLAT. . . . . RSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNG
Query Conservation   
    
 
     
 

 
 

 
 
      .....              

 
   




  
  
 
     


Alig confidence 
































.....









































Template Conservation        
       
 

 
 

 
 
                         
  
   




  
  
 
     


Template Sequence  GLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAAPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVRG
Template Known Secondary structure  TTTSS



S


TT
TTSS


SGGGTT

S
Template Predicted Secondary structure 



































Template SS confidence 















































































   161........170.........180.........190.........200.........210.........220.........230.........240
 
   250.........260.
Predicted Secondary structure 





Query SS confidence 











Query Sequence  HLLVVDGGYLVR
Query Conservation    
 



   
Alig confidence 











Template Conservation    
 



  
 
Template Sequence  AAWNVDGGWLAQ
Template Known Secondary structure 
STTTTT
Template Predicted Secondary structure 







Template SS confidence 











   245....250......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions