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Job DescriptionP76633
Confidence98.79%DateThu Jan 5 12:25:09 GMT 2012
Rank240Aligned Residues233
% Identity15%Templatec2q1uA_
PDB info PDB header:sugar binding proteinChain: A: PDB Molecule:putative nucleotide sugar epimerase/ dehydratase; PDBTitle: crystal structure of the bordetella bronchiseptica enzyme wbmf in2 complex with nad+ and udp
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60.........70.........80.........90.
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Query Sequence  DFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCER
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Template Sequence  NASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN. . VPDHPAVRFSETSITDDALLASLQDEYDYV
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   6...10.........20.........30.........40.........50... ......60.........70.........80...
 
   92.......100.........110.........120.........130.........140.........150.........160.........170.
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Query Sequence  FGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKH
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Template Sequence  . . . . . . . . . . . FHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGEETDIVSLHNNDSPYSMSKI
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   84.....90.........100.........110.........120.........130.........140.........150..
 
   172.......180.........190 .........200.........210.........220.... .....230..
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Query Sequence  ALAGFTKAYCDELGQYNIQ. . . . . . . . . . VNGIAPGYYATDITLATRSNPETNQRVLDHIPAN. . . . . . . . . RWGDTQDL
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Template Sequence  FGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDV
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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   233......240.........250.........260
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Query Sequence  MGAAVFLASPASNYVNGHLLVVDGGYLV
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Template Sequence  ANGLIACAADGTP. . . GGVYNIASGKET
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   247..250......... 260.........270.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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