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Job DescriptionP76633
Confidence100.00%DateThu Jan 5 12:25:09 GMT 2012
Rank161Aligned Residues216
% Identity20%Templatec2nwqA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:probable short-chain dehydrogenase; PDBTitle: short chain dehydrogenase from pseudomonas aeruginosa
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70.........80.........90........
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Query Sequence  KTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERFGTVDIL
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Template Sequence  STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAXSAAVDNLPEEFATLRGL
Template Known Secondary structure 
SSTTTSSTT
S
TTTS


TT
T

GGGSS

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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   99100.........110.........120. ........130.........140...... ...150.........160.........170......
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Query Sequence  VNNAGICKLNKVLDFGRADWDPM. IDVNLTAAFELSYEAAKIMIPQKSG. KIINICSLFSYLGGQWSPAYSATKHALAGF
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Template Sequence  INNAGLALGTDPAQSCDLDDWDTXVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQF
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GGG

T
TT


GGGTS

TT
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   177..180.........190.........200.........210.........220.........230.........240.........250......
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Query Sequence  TKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDG
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Template Sequence  SLNLRCDLQGTGVRVTNLEPGLCEGA. . . . . . . . . . . . . . . . . . . . . . HPIQPEDIAETIFWIXNQPA. HLNINSLEIXP
Template Known Secondary structure  TT
TTS


SB


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B
TS
T.T





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   163......170.........180........ .190.........200........ .210.........
 
   257
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Query Sequence  G
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Template Sequence  V
Template Known Secondary structure  T
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   240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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