Return to main results Retrieve Phyre Job Id

Job DescriptionP76633
Confidence99.47%DateThu Jan 5 12:25:09 GMT 2012
Rank210Aligned Residues220
% Identity15%Templatec2gn9B_
PDB info PDB header:lyaseChain: B: PDB Molecule:udp-glcnac c6 dehydratase; PDBTitle: crystal structure of udp-glcnac inverting 4,6-dehydratase in complex2 with nadp and udp-glc
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40. ........50.........60.........70.........80.........90...
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Query Sequence  LKGKTAIVTGGNSGLGQAFAMALAKA. . GANIFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERFG
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Template Sequence  LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAM. EFNDPRMRFFIGDVRDLE. . . . . . . RLNYALE
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BS
TTTSSB
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.S

TT

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   8.10.........20.........30.........40.........50.... .....60.........70.. .......
 
   94.....100.........110.........120.........130.........140.........150.........160.........170...
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Query Sequence  TVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHAL
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Template Sequence  GVDICIHAAALKHVPIAEYNPLECIKTNI. . . . . . . . MGASNVINACLKNAISQVIALSTDKAANPI. . . NLYGATKLCS
Template Known Secondary structure  T
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GGGSS

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   80.........90.........100........ .110.........120.........130........ .140........
 
   174.....180.........190.........200.........210.........220..... ....230.........240.......
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Query Sequence  AGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANR. . . . . . WGDTQDLMGAAVFLASPASNYV
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Template Sequence  DKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMH. . .
Template Known Secondary structure  GGG

SSS




SS
TT
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   149150.........160.........170.........180.........190.........200.........210.........220.....
 
   248.250.......
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Query Sequence  NGHLLVVDGG
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Template Sequence  GGEIFVPKIP
Template Known Secondary structure  SS



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   226...230.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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