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Job DescriptionP76633
Confidence100.00%DateThu Jan 5 12:25:09 GMT 2012
Rank47Aligned Residues245
% Identity30%Templatec1w4zA_
PDB info PDB header:antibiotic biosynthesisChain: A: PDB Molecule:ketoacyl reductase; PDBTitle: structure of actinorhodin polyketide (actiii) reductase
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50...... ...60.........70.........80.........90...
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Query Sequence  SLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGE. TKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERFG
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Template Sequence  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG
Template Known Secondary structure 

SS
S
SSTT
S
TT



TT
T
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   94.....100.........110.........120.........130....... ..140.........150.........160.........170.
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Query Sequence  TVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAA. . KIMIPQKSGKIINICSLFSYLGGQWSPAYSATKH
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Template Sequence  PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKH
Template Known Secondary structure  S
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S
GGG

TTTTST


GGGTS

TT
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   172.......180.........190.........200.........210 .........220.........230.........240..
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Query Sequence  ALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSN. . . . . . . . . PETNQRVLDHIPANRWGDTQDLMGAAVFLASP
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Template Sequence  GVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGP
Template Known Secondary structure  GGGT
SB
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TTSTTSS
B
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   243......250.........
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Query Sequence  ASNYVNGHLLVVDGGYL
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Template Sequence  GAAAVTAQALNVCGGLG
Template Known Secondary structure  GGTT

S
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   243......250.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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