Return to main results Retrieve Phyre Job Id

Job DescriptionP76633
Confidence99.35%DateThu Jan 5 12:25:09 GMT 2012
Rank214Aligned Residues155
% Identity15%Templatec1luaA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:methylene tetrahydromethanopterin dehydrogenase; PDBTitle: structure of methylene-tetrahydromethanopterin dehydrogenase from2 methylobacterium extorquens am1 complexed with nadp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.........70.........80.........90...
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  FSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERFG
Query Conservation    
 

 






 


 
 
  
   

 

   
                       
                   
Alig confidence 










































































.....
Template Conservation    
 

 
 
 

 
  
   
  
   
  
 
  
        
  
     
     
      
       .....
Template Sequence  GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGA. . . . .
Template Known Secondary structure  S

TT
TTTSTT
SST




STTT
.....
Template Predicted Secondary structure 
























.....
Template SS confidence 















































































   116...120.........130.........140.........150.........160.........170.........180.........190
 
   94.....100.........110.........120.........130.........140.........150.........160.........170...
Predicted Secondary structure 


















































Query SS confidence 















































































Query Sequence  TVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHAL
Query Conservation                                                            

            
  

 
 
Alig confidence 





























































......











Template Conservation 



  
 

                   


      
  
               
  

......
   
   


 
Template Sequence  HFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGI. . . . . . GGLKLKLHRACI
Template Known Secondary structure  S


TT


B
T
TT




SSS
SBTT

TT
TT
......
Template Predicted Secondary structure 






















......

Template SS confidence 















































































   191........200.........210.........220.........230.........240.........250.. .......260....
 
   174.....
Predicted Secondary structure 
Query SS confidence 





Query Sequence  AGFTKA
Query Conservation    
   
Alig confidence 





Template Conservation    
 

Template Sequence  AKLFES
Template Known Secondary structure  TS
Template Predicted Secondary structure 

Template SS confidence 





   265....270
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions