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Job DescriptionP76633
Confidence99.97%DateThu Jan 5 12:25:09 GMT 2012
Rank176Aligned Residues232
% Identity19%Templatec1fdvA_
PDB info PDB header:dehydrogenaseChain: A: PDB Molecule:17-beta-hydroxysteroid dehydrogenase; PDBTitle: human 17-beta-hydroxysteroid-dehydrogenase type 1 mutant2 h221l complexed with nad+
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.... .....50...... ...60.........70.........80.........
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Query Sequence  KGKTAIVTGGNSGLGQAFAMALAKAGAN. . . IFIPSFVKDNGE. . . . TKEMIEKQGVEVDFMQVGITAEGAPQKIIAACC
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Template Sequence  ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT
Template Known Secondary structure 

S

SS
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SSGGG
TT

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T
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   90.........100.........110.........120.........130.........140.........150.........160.........
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Query Sequence  ERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSAT
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Template Sequence  E. . GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCAS
Template Known Secondary structure  T..S

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BS
GGGS
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GGGTS

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   81 ........90.........100.........110.........120.........130.........140.........150........
 
   170.........180.........190.........200.........210....... ..220.........230....
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Query Sequence  KHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRV. . . . . . . . . . . . . . . LDHIPANRWGDTQDLMG
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Template Sequence  KFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLALSKQVFREAAQNPEEVAE
Template Known Secondary structure  GGGT
S
BSSSTTGGGB

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B
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   159160.........170.........180.........190.........200.........210.........220.........230........
 
   235....240 .........250
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Query Sequence  AAVFLA. . . SPASNYVNGH
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Template Sequence  VFLTALRAPKPTLRYFTTE
Template Known Secondary structure 
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   239240.........250.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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