Job Description P09424 Confidence 97.14% Date Thu Jan 5 11:02:22 GMT 2012 Rank 11 Aligned Residues 231 % Identity 13% Template c3k96B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glycerol-3-phosphate dehydrogenase [nad(p)+]; PDBTitle: 2.1 angstrom resolution crystal structure of glycerol-3-phosphate2 dehydrogenase (gpsa) from coxiella burnetii Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	H	F	G	A	G	N	I	G	R	G	F	I	G	K	L	L	A	D	A	G	I	Q	L	T	F	A	D	V	N	Q	V	V	L	D	A	L	N	A	R	H	S	Y	Q	V	H	V	V	G	E	T	E	Q	V	D	T	V	S	G	V	N	A	V	S	S	I	G	D	D	V	V	D	L	I	A	Q	V	D
Query Conservation
Alig confidence																				.																																											.	.	.	.	.	.	.	.
Template Conservation																				.																																											.	.	.	.	.	.	.	.
Template Sequence		P	I	A	I	L	G	A	G	S	W	G	T	A	L	A	L	V	L	.	A	R	K	G	Q	K	V	R	L	W	S	Y	E	S	D	H	V	D	E	M	Q	A	E	G	V	N	N	R	Y	L	P	N	Y	P	F	P	E	T	L	K	A	Y	.	.	.	.	.	.	.	.	C	D	L	K	A	S	L	E	G	V	T
Template Known Secondary structure									S											.		T	T	T								S												S	S	B	T	T	T	B	T	T					T	T					.	.	.	.	.	.	.	.	S							T	T
Template Predicted Secondary structure																				.																																											.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.									.	.	.	70	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	T	T	A	V	G	P	V	V	L	E	R	I	A	P	A	I	A	K	G	Q	V	K	R	K	E	Q	G	N	E	S	P	L	N	I	I	A	C	E	N	M	V	R	G	T	T	Q	L	K	G	H	V	M	N	A	L	P	E	D	A	K	A	W	V	E	E	H	V	G	F	V	D	S	A	V	D	R	I	V
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	L	I	V	V	P	S	F	A	F	H	E	V	I	T	R	M	K	P	L	I	.	.	.	.	.	.	.	.	D	A	K	T	R	I	A	W	G	T	K	G	L	A	K	G	S	R	L	L	H	E	V	V	A	.	.	.	.	.	.	.	.	.	.	T	E	L	G	Q	V	P	M	A	V	I	S	G	P	S
Template Known Secondary structure																				T	T	T		.	.	.	.	.	.	.	.		T	T									S			T	T	T									.	.	.	.	.	.	.	.	.	.					S								S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.									100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.											.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	S	A	S	A	T	N	D	P	L	E	V	T	V	E	T	F	S	E	W	I	V	D	K	T	Q	F	K	G	A	L	P	N	I	P	G	M	E	L	T	D	N	L	M	A	F	V	E	R	K	L	F	T	L	N	T	G	H	A	I	T	A	Y	L	G	K	L	A	G	H	Q	T	I	R	D	A	I	L	D
Query Conservation
Alig confidence																												.																											.	.	.	.																.	.	.	.	.
Template Conservation																												.																											.	.	.	.																.	.	.	.	.
Template Sequence		L	A	T	E	V	A	A	N	L	P	T	A	V	S	L	A	S	N	N	S	Q	F	S	K	D	L	.	I	E	R	L	H	G	Q	R	F	R	V	Y	K	N	D	D	M	I	G	V	E	L	C	G	S	V	.	.	.	.	K	N	I	L	A	I	A	T	G	I	S	D	G	L	K	.	.	.	.	.	L	G	S
Template Known Secondary structure								T	T										S									.							S	S							S												.	.	.	.														T	T	.	.	.	.	.
Template Predicted Secondary structure																												.																											.	.	.	.																.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.					.	.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	I	R	A	V	V	K	G	A	M	E	E	S	G	A	V	L	I	K	R	Y	G	F	D	A	D	K	H
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		N	A	R	A	A	L	I	T	R	G	L	T	E	M	.	G	R	L	V	S	V	F	G	G	K	Q	E	T	L
Template Known Secondary structure																.								T
Template Predicted Secondary structure																.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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