Job Description P09424 Confidence 95.96% Date Thu Jan 5 11:02:22 GMT 2012 Rank 25 Aligned Residues 271 % Identity 15% Template c3i83B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:2-dehydropantoate 2-reductase; PDBTitle: crystal structure of 2-dehydropantoate 2-reductase from methylococcus2 capsulatus Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	H	F	G	A	G	N	I	G	R	G	F	I	G	K	L	L	A	D	A	G	I	Q	L	T	F	A	D	V	N	Q	V	V	L	D	A	L	N	A	R	H	S	Y	Q	V	H	V	V	G	E	T	E	Q	V	D	T	V	S	G	V	N	A	V	S	S	I	G	D	D	V	V	D	L	I	A	Q	V	D
Query Conservation
Alig confidence													.																						.	.									.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																						.	.									.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	I	L	V	I	G	T	G	A	I	G	.	S	F	Y	G	A	L	L	A	K	T	G	H	C	V	S	V	V	S	R	S	D	.	.	Y	E	T	V	K	A	K	G	.	.	.	I	R	I	R	S	A	T	L	G	D	Y	T	F	R	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	A	V	V	R	D
Template Known Secondary structure							S		S				.											T								S	T	T	.	.							T		.	.	.						S	S	S							.	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure													.																						.	.									.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.														.	.	.	.	60	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	T	T	A	V	G	P	V	V	L	E	R	I	A	P	A	I	A	K	G	Q	V	K	R	K	E	Q	G	N	E	S	P	L	N	I	I	A	C	E	N	M	V	R	G	T	T	Q	L	K	G	H	V	M	N	A	L	P	E	D	A	K	A	W	V	E	E	H	V	G	F	V	D	S	A	V	D	R	I	V
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	T	L	L	C	D	R	V	G	L	L	R	D	A	V	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	L	I	S	N	G	I	D	I	E	P	E	V	A	A	A	F	P	E	V	I	.	.	.	.	.	.	.	.	.	.	.	S	G	L	A	F	I	G	V	T	R	T	A
Template Known Secondary structure												T	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S	S	S		S												.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.																			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110												.	.	.	.	.	.	.	.	.	120	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		P	P	S	A	S	A	T	N	D	P	L	E	V	T	V	E	T	F	S	E	W	I	V	D	K	T	Q	F	K	G	A	L	P	.	N	I	P	G	M	E	L	T	D	N	L	M	A	F	V	E	R	K	L	F	T	L	N	T	G	H	A	I	T	A	Y	L	G	K	L	A	G	H	Q	T	I	R	D	A	I	L
Query Conservation																																			.
Alig confidence																																			.																					.	.	.	.														.	.
Template Conservation																																																								.	.	.	.														.	.
Template Sequence		P	G	E	I	W	H	Q	A	Y	G	R	L	M	L	G	N	Y	P	G	G	V	S	E	R	V	K	T	L	A	A	A	F	E	E	A	G	I	D	G	I	A	T	E	N	I	T	T	A	R	W	Q	K	C	V	.	.	.	.	W	N	A	A	F	N	P	L	S	V	L	S	G	.	.	G	L	D	T	L	D	I
Template Known Secondary structure		T	T															S	S	S																T	T	S						S												.	.	.	.												T	T	.	.	S
Template Predicted Secondary structure																																																								.	.	.	.														.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	K	I	R	A	V	V	K	G	A	M	E	E	S	G	A	V	L	I	K	R	Y	G	F	D	A	D	K	H	A	A	Y	I	Q	K	I	L	G	R	F	E	N	P	Y	L	K	D	D	V	E	R	V	G	R	Q	P	L	R	K	L	S	A	G	D	R	L	I	K	P	L	L	G	T	L	E	Y	G	L	P
Query Conservation
Alig confidence																																											.															.	.
Template Conservation																																											.															.	.
Template Sequence		L	S	T	Q	E	G	F	V	R	A	I	M	Q	E	I	R	A	V	A	A	A	N	G	H	P	L	P	E	D	I	V	E	K	N	V	A	S	T	Y	K	M	.	P	P	Y	K	T	S	M	L	V	D	F	E	A	G	.	.	Q	P	M	E	T	E	V	I	L	G	N	A	V	R	A	G	R	R	T	R	V	A
Template Known Secondary structure																							T	T					T	T												S	.		S												T	.	.				S															T	T
Template Predicted Secondary structure																																											.															.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		321	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	N	L	I	E	G	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	H	L	E	S	V	Y	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions