Job Description P09424 Confidence 97.01% Date Thu Jan 5 11:02:22 GMT 2012 Rank 15 Aligned Residues 214 % Identity 19% Template c2qytA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:2-dehydropantoate 2-reductase; PDBTitle: crystal structure of 2-dehydropantoate 2-reductase from porphyromonas2 gingivalis w83 Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.							.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.
Query Sequence		M	K	A	L	H	F	G	A	G	N	I	G	R	G	F	I	G	K	L	L	A	D	A	G	.	.	.	.	.	.	I	Q	L	T	F	A	D	V	N	Q	V	V	L	D	A	L	N	A	R	H	S	Y	Q	V	H	V	V	G	E	T	E	Q	V	D	T	V	S	G	V	N	A	V	S	S	I	G	D	D	V	V
Query Conservation																										.	.	.	.	.	.
Alig confidence														.												.	.	.	.	.	.							.																			.	.	.	.																				.	.
Template Conservation														.																								.																			.	.	.	.																				.	.
Template Sequence		I	K	I	A	V	F	G	L	G	G	V	G	.	G	Y	Y	G	A	X	L	A	L	R	A	A	A	T	D	G	L	L	E	V	S	W	I	.	A	R	G	A	H	L	E	A	I	R	A	A	G	G	L	R	V	V	.	.	.	.	T	P	S	R	D	F	L	A	R	P	T	C	V	T	D	N	P	A	E	.	.
Template Known Secondary structure										S				.														T	T	S	S							.													T	S					.	.	.	.		S	S								S				S					.	.
Template Predicted Secondary structure														.																								.																			.	.	.	.																				.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	I	A	Q	V	D	L	V	T	T	A	V	G	P	V	V	L	E	R	I	A	P	A	I	A	K	G	Q	V	K	R	K	E	Q	G	N	E	S	P	L	N	I	I	A	C	E	N	M	V	R	G	T	T	Q	L	K	G	H	V	M	N	A	L	P	E	D	A	K	A	W	V	E	E	H	V	G	F	V	D
Query Conservation
Alig confidence		.	.																												.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																												.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	V	G	T	V	D	Y	I	L	F	C	T	K	D	Y	D	X	E	R	G	V	A	E	I	R	P	X	I	.	.	.	.	.	.	.	.	G	Q	N	T	K	I	L	P	L	L	N	G	A	D	I	A	E	R	X	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	P	D
Template Known Secondary structure		.	.												S	S	S										G	G	G		.	.	.	.	.	.	.	.										S		S	S	S						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S		T
Template Predicted Secondary structure		.	.																												.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.									.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																			.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.												.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	V	D	R	I	V	P	P	S	A	S	A	T	N	D	P	L	E	V	T	V	E	T	F	S	E	W	I	V	D	K	T	Q	F	K	G	A	L	P	N	I	P	.	.	.	.	.	.	.	.	.	.	.	G	M	E	L	T	D	N	L	M	A	F	V	E	R	K	L	F	T	L	N	T	G	H	A	I	T
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	V	W	K	G	C	V	Y	I	S	A	R	K	S	A	P	G	L	I	T	L	E	A	D	R	E	L	F	Y	F	G	S	G	L	P	E	Q	T	D	D	E	V	R	L	A	E	L	L	T	A	A	G	I	R	A	Y	N	P	T	D	I	D	W	Y	I	X	K	K	F	X	X	I	S	V	T	A	T	A	T
Template Known Secondary structure		T	T	B														T	T																	S	S	S															T	T							S
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	L	G	K	L	A	G	H	Q	T	I	R	D	A	I	L	D	E	K	I	R	A	V	V	K	G	A	M	E	E	S	G	A
Query Conservation
Alig confidence										.	.	.	.	.							.	.
Template Conservation										.	.	.	.	.							.	.
Template Sequence		A	Y	F	D	K	P	I	G	.	.	.	.	.	S	I	L	T	E	H	.	.	E	P	E	L	L	S	L	L	E	E	V	A	E
Template Known Secondary structure					T	S				.	.	.	.	.							.	.
Template Predicted Secondary structure										.	.	.	.	.							.	.
Template SS confidence
		210	.	.	.	.	.	.	.						.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions