Job Description P09424 Confidence 62.15% Date Thu Jan 5 11:02:22 GMT 2012 Rank 204 Aligned Residues 166 % Identity 16% Template c1r0lD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: 1-deoxy-d-xylulose 5-phosphate reductoisomerase from2 zymomonas mobilis in complex with nadph Resolution 2.70 Å

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		2	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure									.																.											.	.	.																						.	.	.	.	.
Query SS confidence									.																.											.	.	.																						.	.	.	.	.
Query Sequence		K	A	L	H	F	G	A	.	G	N	I	G	R	G	F	I	G	K	L	L	A	D	A	.	G	I	Q	L	T	F	A	D	V	N	.	.	.	Q	V	V	L	D	A	L	N	A	R	H	S	Y	Q	V	H	V	V	G	E	T	.	.	.	.	.	E	Q	V	D	T	V	S	G	V	N	A	V	S	S	I	G	D
Query Conservation									.																.											.	.	.																						.	.	.	.	.
Alig confidence									.																.											.	.	.																						.	.	.	.	.
Template Conservation
Template Sequence		T	V	T	V	L	G	A	T	G	S	I	G	H	S	T	L	D	L	I	E	R	N	L	D	R	Y	Q	V	I	A	L	T	A	N	R	N	V	K	D	L	A	D	A	A	K	R	T	N	A	K	R	A	V	I	A	D	P	S	L	Y	N	D	L	K	E	A	L	A	G	S	S	V	E	A	A	A	G	A	D	A
Template Known Secondary structure							T	T	T	S													T	T	T	T									S	S													T		S					S		G	G	G								T	T	T		S						S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.
Query Sequence		D	V	V	D	L	I	A	Q	V	D	L	V	T	T	A	V	G	P	V	V	L	E	R	I	A	P	A	I	A	K	G	Q	V	K	R	K	E	Q	G	N	E	S	P	L	N	I	I	A	C	E	N	M	V	R	G	T	T	Q	L	K	G	H	V	M	N	A	.	.	.	.	.	.	L	P	E	D	A	K	A	W
Query Conservation																																																																				.	.	.	.	.	.
Alig confidence																			.	.														.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation																			.	.														.	.	.	.	.	.	.
Template Sequence		L	V	E	A	A	M	M	G	A	D	W	T	M	A	A	I	I	.	.	G	C	A	G	L	K	A	T	L	A	A	I	R	.	.	.	.	.	.	.	K	G	K	T	V	A	L	A	N	K	E	S	L	V	S	A	G	G	L	M	I	D	A	V	R	E	H	G	T	T	L	L	P	V	D	S	E	H	N	A	I
Template Known Secondary structure							T	S			S								.	.	S	G	G	G										.	.	.	.	.	.	.	T	T	S							T																		T							S
Template Predicted Secondary structure																			.	.														.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.								.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	E	H	V	G	F	V	D	S	A	V	D	R	I	V	P	P	S	A	S	A	T	N	D	P	L	E	V	T	V	E	T	F	S	E	W	I	V	D	K
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.
Template Sequence		F	Q	C	F	P	H	H	N	R	D	Y	V	R	R	I	I	.	.	.	.	.	.	.	.	.	.	I	T	A	S	G	G	P	F	R	T	T	S	L	A	E
Template Known Secondary structure							T	T		G	G	G						.	.	.	.	.	.	.	.	.	.							T	T	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.											.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions