Job Description P0ADK6 Confidence 99.06% Date Thu Jan 5 11:21:14 GMT 2012 Rank 15 Aligned Residues 256 % Identity 10% Template d1xm9a1 SCOP info alpha-alpha superhelix ARM repeat Plakophilin 1 helical region Resolution 2.80

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.										.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																															.	.						.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.						.	.	.	.	.	.	.	.	.
Query Sequence		K	L	N	D	D	E	L	F	R	L	L	D	D	H	N	S	L	K	R	I	S	S	A	R	V	L	Q	L	R	.	.	G	G	Q	D	A	.	.	.	.	.	.	.	.	.	V	R	L	A	I	E	F	C	S	D	K	N	Y	I	R	R	D	I	G	A	F	I	L	G	Q	I	K	I	C	K	K	C	E	D	N
Query Conservation																															.	.						.	.	.	.	.	.	.	.	.
Alig confidence																															.	.						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	T	I	P	K	A	V	Q	Y	L	S	S	Q	D	E	K	Y	Q	A	I	G	A	Y	Y	I	Q	H	T	C	F	Q	D	E	S	A	K	Q	Q	V	Y	Q	L	G	G	I	C	K	L	V	D	L	L	R	S	P	N	Q	N	V	Q	Q	A	A	A	G	A	L	R	N	L	V	F	R	S	T	T	N	K	L
Template Known Secondary structure														S	S		T														T	S	S		S	S								T	T									T	T	S	S																	S	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		91							.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.											.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Query Sequence		V	.	.	.	.	.	.	F	N	I	L	N	N	M	A	L	N	D	K	S	A	C	V	R	A	T	A	I	E	S	T	A	Q	R	C	K	K	N	P	I	Y	S	P	K	I	V	E	Q	S	Q	I	T	A	.	.	.	.	.	.	.	.	.	.	F	D	K	S	T	N	V	R	R	A	T	A	F	A	I	S	V
Query Conservation			.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	T	R	R	Q	N	G	I	R	E	A	V	S	L	L	R	R	T	G	N	A	E	I	Q	K	Q	L	T	G	L	L	W	N	L	S	S	T	D	E	L	K	E	E	L	I	A	D	A	L	P	V	L	A	D	R	V	I	I	P	F	S	G	W	C	V	V	D	P	E	V	F	F	N	A	T	G	C	L	R	N
Template Known Secondary structure						T	T										T	T																			T	S	S	S	T																T	T					T
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.																		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	N	D	K	A	T	I	P	L	L	I	N	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	P	N	G	D	V	R	N	W	A	A	F	A	I	N	I	N	K	Y	D	N	S	D	I	R	D	C	F	V	E	M	L	Q	D	K	N	E	E	V	R	I	E	A	I	I	G	L	S
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	S	A	D	A	G	R	Q	T	M	R	N	Y	S	G	L	I	D	S	L	M	A	Y	V	Q	N	C	V	A	A	S	R	C	D	D	K	S	V	E	N	C	M	C	V	L	H	N	L	S	Y	R	L	D	A	E	V	P	T	R	Y	R	Q	L	E	Y	N	A	L	P	E	E	E	T	N	P	K	G	S	G
Template Known Secondary structure			T	T	S								T	T	S	T	T																T		T	T		T	T												T	T	T					S										T							S	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250																	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	R	K	D	K	R	V	L	S	V	L	C	D	E	L	.	.	.	K	K	N	T	V	Y	D	D	I	I	E	A	A	G	E	L	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	L	L	P	V	L	D	T	M	L	Y	K	F	D	D	N	E	I	I	T	S	A	I	D	K	L	K
Query Conservation																	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																																																			.
Template Sequence		W	L	Y	H	S	D	A	I	R	T	Y	L	N	L	M	G	K	S	K	K	D	A	T	L	E	A	C	A	G	A	L	Q	N	L	T	A	S	K	G	L	M	S	S	G	M	S	Q	L	I	G	L	K	E	K	G	L	P	Q	I	A	R	L	L	Q	S	.	G	N	S	D	V	V	R	S	G	A	S	L	L	S
Template Known Secondary structure		G	G	G	S																															T	T		S	S	S											T	T	S										T	T		.	S
Template Predicted Secondary structure																																																																			.
Template SS confidence
		521	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.		.	.	.	.	590	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions