Job Description P0ADK6 Confidence 99.67% Date Thu Jan 5 11:21:14 GMT 2012 Rank 4 Aligned Residues 277 % Identity 13% Template d1gw5b_ SCOP info alpha-alpha superhelix ARM repeat Clathrin adaptor core protein Resolution 2.59

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.									.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																.	.																																						.	.	.	.	.	.	.	.
Query SS confidence																.	.																																						.	.	.	.	.	.	.	.
Query Sequence		S	N	T	Y	Q	K	R	K	A	S	K	E	Y	G	.	.	L	Y	N	Q	C	K	K	L	N	D	D	E	L	F	R	L	L	D	D	H	N	S	L	K	R	I	S	S	A	R	V	L	Q	L	R	G	G	.	.	.	.	.	.	.	.	Q	D	A	V	R	L	A	I	E	F	C	S	D	K	N	Y	I	R	R
Query Conservation																.	.																																						.	.	.	.	.	.	.	.
Alig confidence																.	.																																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	N	P	L	I	R	A	L	A	V	R	T	M	G	C	I	R	V	D	K	I	T	E	Y	L	C	E	P	L	R	K	C	L	K	D	E	D	P	Y	V	R	K	T	A	A	V	C	V	A	K	L	H	D	I	N	A	Q	M	V	E	D	Q	G	F	L	D	S	L	R	D	L	I	A	D	S	N	P	M	V	V
Template Known Secondary structure		S	S													T			S	T	T	S												T	S		S	S															T	T	S	S				S	T											T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.						.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		D	I	G	A	F	I	L	G	Q	I	K	I	C	K	.	.	.	.	.	K	C	E	D	N	V	F	N	I	L	N	N	M	A	L	N	D	K	S	A	C	V	R	A	T	A	I	E	S	T	A	Q	R	C	K	K	N	P	I	Y	S	P	K	I	V	E	Q	S	Q	I	T	A	F	D	K	S	T	N	V	R	R
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.
Template Conservation
Template Sequence		A	N	A	V	A	A	L	S	E	I	S	E	S	H	P	N	S	N	L	L	D	L	N	P	Q	N	I	N	K	L	L	T	A	L	N	E	C	T	E	W	G	Q	I	F	I	L	D	C	L	S	N	Y	N	P	K	D	D	R	E	A	Q	S	I	C	E	R	V	T	P	R	L	S	H	A	N	S	A	V	V	L
Template Known Secondary structure												T	T	S			S		S	S		S																S													T	T	S				S												T	T		S		S	S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.													.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Query Sequence		A	T	A	F	A	I	S	V	I	N	D	K	.	.	.	.	.	.	.	.	.	.	.	.	A	T	I	P	L	L	I	N	L	L	K	D	P	N	G	D	V	R	N	W	A	A	F	A	I	N	I	N	K	Y	D	N	S	D	.	.	.	I	R	D	C	F	V	E	M	L	Q	D	K	N	E	E	V	R	I	E
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Conservation
Template Sequence		S	A	V	K	V	L	M	K	F	L	E	L	L	P	K	D	S	D	Y	Y	N	M	L	L	K	K	L	A	P	P	L	V	T	L	L	S	G	E	P	E	V	Q	Y	V	A	L	R	N	I	N	L	I	V	Q	K	R	P	E	I	L	K	Q	E	I	K	V	F	F	V	K	Y	N	D	P	I	Y	V	K	L	E
Template Known Secondary structure										S			S			S	T	T	S	S								S								T	T	S																		S			S	T	T	T	T		T	T	T	T				T	T	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.							.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250							.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.																			.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.																			.	.	.	.	.	.
Query Sequence		A	I	I	G	L	S	Y	R	K	D	K	R	V	L	S	V	L	C	D	E	L	.	.	.	.	.	.	K	K	N	T	V	Y	D	D	I	I	E	A	A	G	E	L	G	D	.	.	.	.	.	.	K	T	L	L	P	V	L	D	T	M	L	Y	K	F	D	D	N	E	I	I	T	S	A	I	D	K	L	K	R
Query Conservation																							.	.	.	.	.	.																			.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.																			.	.	.	.	.	.														.
Template Conservation																																																																		.
Template Sequence		K	L	D	I	M	I	R	L	A	S	Q	A	N	I	A	Q	V	L	A	E	L	K	E	Y	A	T	E	V	D	V	D	F	V	R	K	A	V	R	A	I	G	R	C	A	I	K	V	E	Q	S	A	E	R	C	V	S	T	L	L	D	L	I	Q	T	.	K	V	N	Y	V	V	Q	E	A	I	V	V	I	R	D
Template Known Secondary structure									T			T	T	T												T	T	S	S																	T	T																			.
Template Predicted Secondary structure																																																																		.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.		.	.	.	.	.	.	.	.	410	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions