Job Description P0ADK6 Confidence 99.52% Date Thu Jan 5 11:21:14 GMT 2012 Rank 6 Aligned Residues 261 % Identity 11% Template c3l6yA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:catenin delta-1; PDBTitle: crystal structure of p120 catenin in complex with e-cadherin Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.												.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	N	Q	C	K	K	L	N	D	D	E	L	F	R	L	L	D	D	H	N	S	L	K	R	I	S	S	A	R	V	L	Q	L	R	G	G	Q	.	.	.	.	.	.	.	.	.	.	.	D	A	V	R	L	A	I	E	F	C	S	D	K	N	Y	I	R	R	D	I	G	A	F	I	L	G	Q	I	K	I	C	K
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	P	N	W	R	Q	P	E	L	P	E	V	I	A	M	L	G	F	R	L	D	A	V	K	S	N	A	A	A	Y	L	Q	H	L	C	Y	R	N	D	K	V	K	T	D	V	R	K	L	K	G	I	P	V	L	V	G	L	L	D	H	P	K	K	E	V	H	L	G	A	C	G	A	L	K	N	I	S	F	G	R
Template Known Secondary structure																	T	T		S																	T	T											T	T									T	T		S	S															T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
		86								.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.															140	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	.	.	.	.	.	.	.	C	E	D	N	V	F	N	I	L	N	N	M	A	L	N	D	K	S	A	C	V	R	A	T	A	I	E	S	T	A	Q	R	C	K	K	N	P	I	Y	S	P	K	I	V	E	Q	S	Q	I	T	A	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	T	N	V
Query Conservation			.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Q	D	N	K	I	A	I	K	N	C	D	G	V	P	A	L	V	R	L	L	R	K	A	R	D	M	D	L	T	E	V	I	T	G	T	L	W	N	L	S	S	H	D	S	I	K	M	E	I	V	D	H	A	L	H	A	L	T	D	E	V	I	I	P	H	S	G	W	E	R	E	P	H	I	E	W	E	S	V
Template Known Secondary structure												T	T														S																T	S																			T						T			S
Template Predicted Secondary structure
Template SS confidence
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.								.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.
Query Sequence		R	R	A	T	A	F	A	I	S	V	I	N	D	K	A	T	I	P	L	L	I	N	L	L	K	D	P	N	G	D	V	R	N	W	A	A	F	A	I	N	I	N	K	Y	D	N	S	D	I	R	.	.	.	.	.	.	.	D	C	F	V	E	M	L	Q	D	K	N	E	E	V	R	I	E	A	I	I	G	L	S
Query Conservation																																																				.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	N	T	A	G	C	L	R	N	V	S	S	E	R	S	E	A	R	R	K	L	R	E	C	D	G	L	V	D	A	L	I	F	I	V	Q	A	E	I	G	Q	K	D	S	D	S	K	L	V	E	N	C	V	C	L	L	R	N	L	S	Y	Q	V	H	R	E	I	P	Q	A	E	R	S	P	A	R	G	Y	E
Template Known Secondary structure													T	S	S										T	S	T	T														T	T	T		S																	T	T					S	T	T								G	G	G
Template Predicted Secondary structure
Template SS confidence
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.																250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	R	K	D	K	R	V	L	S	V	L	C	D	E	L	.	.	.	K	K	N	T	V	Y	D	D	I	I	E	A	A	G	E	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	T	L	L	P	V	L	D	T	M	L	Y	K	F	D	D	N	E	I	I	T	S	A	I	D	K	L	K
Query Conservation																	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																																																		.
Template Sequence		L	L	F	Q	P	E	V	V	R	I	Y	I	S	L	L	K	E	S	K	T	P	A	I	L	E	A	S	A	G	A	I	Q	N	L	C	A	G	R	W	T	Y	G	R	Y	I	R	S	A	L	R	Q	E	K	A	L	S	A	I	A	D	L	L	T	N	.	E	H	E	R	V	V	K	A	A	S	G	A	L	R
Template Known Secondary structure		G	G	G	S																																	S		S											T	S										G	G	G		.	S
Template Predicted Secondary structure																																																																		.
Template SS confidence
		652	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.		.	.	.	.	720	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions