Job Description P0ADK6 Confidence 98.93% Date Thu Jan 5 11:21:14 GMT 2012 Rank 19 Aligned Residues 243 % Identity 14% Template c3ifqB_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:plakoglobin; PDBTitle: interction of plakoglobin and beta-catenin with desmosomal2 cadherins Resolution 2.80 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.												.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		N	D	D	E	L	F	R	L	L	D	D	H	N	S	L	K	R	I	S	S	A	R	V	L	Q	L	R	G	G	.	.	.	.	.	.	.	.	.	.	.	Q	D	A	V	R	L	A	I	E	F	C	S	D	.	K	N	Y	I	R	R	D	I	G	A	F	I	L	G	Q	I	K	I	C	K	K	C	E	D	N	V
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		A	L	P	E	L	T	K	L	L	N	D	E	D	P	V	V	V	T	K	A	A	M	I	V	N	Q	L	S	K	K	E	A	S	R	R	A	L	M	G	S	P	Q	L	V	A	A	V	V	R	T	M	Q	N	T	S	D	L	D	T	A	R	C	T	T	S	I	L	H	N	L	S	H	H	R	E	G	L	L	A	I
Template Known Secondary structure		T										S	S																T	T	S																						T	T																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		92					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.						.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure			.	.	.	.																											.	.	.	.	.
Query SS confidence			.	.	.	.																											.	.	.	.	.
Query Sequence		F	.	.	.	.	N	I	L	N	N	M	A	L	N	D	K	S	A	C	V	R	A	T	A	I	E	S	T	A	Q	R	.	.	.	.	.	C	K	K	N	P	I	Y	S	P	K	I	V	E	Q	S	Q	I	T	A	F	D	K	S	T	N	V	R	R	A	T	A	F	A	I	S	V	I	N	D	K	A	T	I	P
Query Conservation			.	.	.	.																											.	.	.	.	.
Alig confidence			.	.	.	.																											.	.	.	.	.
Template Conservation
Template Sequence		F	K	S	G	G	I	P	A	L	V	R	M	L	S	S	P	V	E	S	V	L	F	Y	A	I	T	T	L	H	N	L	L	L	Y	Q	E	G	A	K	M	A	V	R	L	A	D	G	L	Q	K	M	V	P	L	L	N	K	N	N	P	K	F	L	A	I	T	T	D	C	L	Q	L	L	A	Y	G	N	Q	E	S
Template Known Secondary structure				T	T								T	T	S																				T	S	T	T								T	T						G	G	G	T	T	S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		L	L	I	N	L	L	K	D	P	N	G	D	V	R	N	W	A	A	F	A	I	N	I	N	K	Y	D	N	S	D	I	R	D	C	F	V	E	M	L	Q	D	K	N	E	E	V	R	I	E	A	I	I	G	L	S	Y	R	K	D	K	R	V	L	S	V	L	C	D	E	L	K	K	N	T	.	.	V	Y	D	D
Query Conservation																																																																												.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	I	I	L	A	N	G	G	P	Q	A	L	V	Q	I	M	R	N	Y	S	Y	E	K	L	L	W	T	T	S	R	V	L	K	V	L	S	V	C	P	S	N	K	P	A	I	.	.	.	.	.	.	.	.	.	.	.	V	E	A	G	G	M	Q	A	L	G	K	H	L	T	S	N	S	P	R	L	V	Q	N
Template Known Secondary structure								T	T																													T	T	S	T	T						.	.	.	.	.	.	.	.	.	.	.			T	T							G	G	G	G		S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.												.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		241	.	.	.	.	.	.	.	.	250								.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.
Query Sequence		I	I	E	A	A	G	E	L	G	D	.	.	.	.	.	.	.	K	T	L	L	P	V	L	D	T	M	L	Y	K	F	D	D	N	E	I	I	T	S	A	I	D	K	L
Query Conservation												.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	L	W	T	L	R	N	L	S	D	V	A	T	K	Q	E	G	L	E	S	V	L	K	I	L	V	N	Q	L	S	V	D	D	V	N	V	L	T	C	A	T	G	T	L
Template Known Secondary structure										T	T	T		T	T		S												T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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