Job Description P0ADK6 Confidence 5.91% Date Thu Jan 5 11:21:14 GMT 2012 Rank 88 Aligned Residues 124 % Identity 12% Template c3bvsA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alkylpurine dna glycosylase alkd; PDBTitle: crystal structure of bacillus cereus alkylpurine dna glycosylase alkd Resolution 2.10 Å

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		6	.	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.																																					.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.																																					.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	K	R	K	A	S	K	E	Y	G	.	.	L	Y	N	Q	C	K	K	L	N	D	D	E	L	F	R	L	L	D	D	H	N	S	L	K	R	I	S	S	A	R	V	L	Q	L	R	G	.	.	.	G	Q	D	A	V	R	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.	.																																					.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.																																					.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	R	Q	L	L	K	D	I	I	Q	I	H	T	L	P	D	Q	K	D	F	Q	I	I	I	R	E	L	W	D	L	P	E	R	E	F	Q	A	A	A	L	D	I	M	Q	K	Y	K	K	H	I	N	E	T	H	I	P	F	L	E	E	L	I	V	T	K	S	W	W	D	S	V	D	S	I	V	P	T	F	L
Template Known Secondary structure																			G	G	G										T	S	S	B														T	G	G	G			G	G	G										S	S							T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
																	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	F	C	S	D	K	N	Y	I	R	R	D	I	G	A	F	I	L	G	Q	I	K	I	C	K	K	C	E	D	N	V	F	N	I	L	N	N	M	A	L	N	D	K	S	A	C	V	R	A	T	A	I	E	S	T	A	Q	R	C	K	K	N	P	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																					.	.
Template Sequence		G	D	I	F	L	K	H	P	E	L	I	S	A	Y	I	P	K	W	I	A	S	D	N	I	W	L	Q	R	A	A	I	L	F	Q	L	.	.	K	Y	K	Q	K	M	D	E	E	L	L	F	W	I	I	G	Q	L	H	S	S	K	E	F	F	I	Q	K	A	I	G	W	V	L	R	E	Y	A	K	T	N	P	D
Template Known Secondary structure									G	G	G	S	T	T	T						T	T	T											T	T	T	.	.	T		G	G	G														T	T																		T	T	T
Template Predicted Secondary structure																																					.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		125	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	P	K	I	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	W	E	Y	V	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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