Job Description P0ADK6 Confidence 6.49% Date Thu Jan 5 11:21:14 GMT 2012 Rank 86 Aligned Residues 215 % Identity 11% Template c2x19B_ PDB info PDB header:nuclear transport Chain: B: PDB Molecule:importin-13; PDBTitle: crystal structure of importin13 - rangtp complex Resolution 2.80 Å

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		25	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.									.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure											.																		.														.																.	.	.	.	.	.	.	.
Query SS confidence											.																		.														.																.	.	.	.	.	.	.	.
Query Sequence		D	D	E	L	F	R	L	L	D	.	D	H	N	S	L	K	R	I	S	S	A	R	V	L	Q	L	R	.	G	G	Q	D	A	V	R	L	A	I	E	F	C	.	S	D	K	N	Y	I	R	R	D	I	G	A	F	I	L	.	.	.	.	.	.	.	.	G	Q	I	K	I	C	K	K	C	E	D	N	V	F	N
Query Conservation											.																		.														.																.	.	.	.	.	.	.	.
Alig confidence											.																		.														.																.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	K	A	L	H	Q	L	Y	Y	D	P	N	I	E	N	K	N	L	A	Q	K	W	L	X	Q	A	Q	V	S	P	Q	A	W	H	F	S	W	Q	L	L	Q	P	D	K	V	P	E	I	Q	Y	F	G	A	S	A	L	H	I	K	I	S	R	Y	W	S	D	I	P	T	D	Q	Y	E	S	L	K	A	Q	L
Template Known Secondary structure																															S	T	T									T	S	T	T	S																				G	G	G	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	N	N	M	A	L	N	D	K	S	A	C	V	R	A	T	A	I	E	S	T	A	Q	R	C	K	K	N	P	I	Y	S	P	K	I	V	E	Q	S	Q	I	T	A	F	D	K	S	T	N	V	R	R	A	T	A	F	A	I	S	V	I	N	D	K	A	T	I	P	L	L	I	N	L	L	K	D	P	N	G
Query Conservation
Alig confidence																																																															.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.
Template Sequence		F	T	Q	I	T	R	F	A	S	G	S	K	I	V	L	T	R	L	C	V	A	L	A	S	L	A	L	S	X	X	P	D	A	W	P	C	A	V	A	D	X	V	R	L	F	Q	A	G	Q	G	R	C	L	A	L	L	E	L	L	T	V	.	.	.	.	.	.	.	.	.	L	P	E	E	F	Q	T	S	R	L
Template Known Secondary structure								T	T	T	S																				T	T	T	T	S	T	T																										.	.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.										.	.	.	170	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	R	N	W	A	A	F	A	I	N	I	N	K	Y	D	N	S	D	I	R	D	C	F	V	E	M	L	Q	D	K	N	E	E	V	R	I	E	A	I	I	G	L	S	Y	R	K	D	K	R	V	L	S	V	L	C	D	E	L	K	K	N	T	V	Y	D	D	I	I	E	A	A	G	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	L	A	V	E	C	G	A	V	F	P	L	L	E	Q	L	L	Q	Q	P	S	S	P	S	C	V	R	Q	K	V	L	K	C	F	S	S	W	V	Q	L	E	V	P	L	Q	D	C	E	A	L	I	Q	A	A	F	A	A	L	Q	D	S	E	L	F	D	S	S	V	E	A	I	V	N	A
Template Known Secondary structure				S	G	G	G													S		T	T																		T	S	S			G	G	G	T											T	T	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions