Job Description P0ADK6 Confidence 98.00% Date Thu Jan 5 11:21:14 GMT 2012 Rank 43 Aligned Residues 174 % Identity 14% Template c2qk2A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:lp04448p; PDBTitle: structural basis of microtubule plus end tracking by xmap215, clip-1702 and eb1 Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.									.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.											.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.																		.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.																		.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		S	N	T	Y	Q	K	R	K	A	S	K	E	Y	G	.	.	.	.	.	.	.	.	L	Y	N	Q	C	K	K	L	N	D	D	E	L	F	R	L	L	.	D	D	H	N	S	L	K	R	I	S	S	A	R	V	L	Q	L	R	G	G	.	.	.	.	.	.	.	.	.	.	Q	D	A	V	R	L	A	I	E	F
Query Conservation																.	.	.	.	.	.	.	.																		.																					.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.																		.																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	W	T	L	R	K	E	S	L	E	V	L	E	K	L	L	T	D	H	P	K	L	E	N	G	E	Y	G	A	L	V	S	A	L	K	K	V	I	T	K	D	S	N	V	V	L	V	A	X	A	G	K	C	L	A	L	L	A	K	G	L	A	K	R	F	S	N	Y	A	S	A	C	V	P	S	L	L	E	K
Template Known Secondary structure		S	S																			S	S	B																				S																				G	G	G	G														G
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.							.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.
Query Sequence		C	S	D	K	N	Y	I	R	R	D	I	G	A	F	I	L	G	Q	I	K	I	C	K	K	C	E	D	N	V	F	N	I	L	N	N	M	A	L	N	D	K	S	A	C	V	R	A	T	A	I	E	S	T	A	Q	R	C	K	K	.	.	.	.	.	.	N	P	I	Y	S	P	K	I	V	E	Q	S	Q	I	T
Query Conservation																																																													.	.	.	.	.	.
Alig confidence																						.	.																																						.	.	.	.	.	.
Template Conservation																						.	.
Template Sequence		F	K	E	K	K	P	N	V	V	T	A	L	R	E	A	I	D	A	I	Y	.	.	A	S	T	S	L	E	A	Q	Q	E	S	I	V	E	S	L	S	N	K	N	P	S	V	K	S	E	T	A	L	F	I	A	R	A	L	T	R	T	Q	P	T	A	L	N	K	K	L	L	K	L	L	T	T	S	L	V	K	T
Template Known Secondary structure		G	G																			.	.	T	T	S													T	T		S																	T	T			G	G	G
Template Predicted Secondary structure																						.	.
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.			390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	D	K	S	T	N	V	R	R	A	T	A	F	A	I	S	V	I	N	D	K	A	T	I	P	L	L	I	N	L	L	K	D	P	N	G	D	V	R	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	E	P	D	P	T	V	R	D	S	S	A	E	A	L	G	T	L	I	K	L	X	G	D	K	A	V	T	P	L	L	A	D	V	D	P	L	K	X	A
Template Known Secondary structure			T	S	S																									G	G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions