Job Description P0ADK6 Confidence 47.64% Date Thu Jan 5 11:21:14 GMT 2012 Rank 67 Aligned Residues 222 % Identity 10% Template c2iw3B_ PDB info PDB header:translation Chain: B: PDB Molecule:elongation factor 3a; PDBTitle: elongation factor 3 in complex with adp Resolution 2.4 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.																		.
Query SS confidence																																				.	.	.	.	.	.	.																		.
Query Sequence		Y	N	Q	C	K	K	L	N	D	D	E	L	F	R	L	L	D	D	H	N	S	L	K	R	I	S	S	A	R	V	L	Q	L	R	.	.	.	.	.	.	.	G	G	Q	D	A	V	R	L	A	I	E	F	C	S	D	K	N	.	Y	I	R	R	D	I	G	A	F	I	L	G	Q	I	K	I	C	K	K	C	E
Query Conservation																																				.	.	.	.	.	.	.																		.
Alig confidence																																				.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		V	E	P	Y	I	V	Q	L	V	P	A	I	C	T	N	A	G	N	K	D	K	E	I	Q	S	V	A	S	E	T	L	I	S	I	V	N	A	V	N	P	V	A	I	K	A	L	L	P	H	L	T	N	A	I	V	E	T	N	K	W	Q	E	K	I	A	I	L	A	A	F	S	A	X	V	D	A	A	K	D	Q
Template Known Secondary structure		T						T	T								T	T		S	S																		S		G	G	G																																			S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		89	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		D	N	V	.	.	.	.	F	N	I	L	N	N	M	A	L	N	D	K	S	A	C	V	R	A	T	A	I	E	S	T	A	Q	R	C	K	K	N	P	I	Y	S	P	K	I	V	E	Q	S	Q	I	T	A	F	D	K	S	T	N	V	R	R	A	T	A	F	A	I	S	V	I	N	D	K	A	T	I	P	L	L
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.
Template Conservation
Template Sequence		V	A	L	R	X	P	E	L	I	P	V	L	S	E	T	X	W	D	T	K	K	E	V	K	A	A	A	T	A	A	X	T	K	A	T	E	T	V	D	N	K	D	I	E	R	F	I	P	S	L	I	Q	C	I	A	D	P	T	E	V	P	E	T	V	H	L	L	G	A	T	T	F	V	A	E	V	T	P	A	T
Template Known Secondary structure																	T	T		S																G	G	G			S	S	T	T	G	G	G											G	G	G									T	T					S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	L	L	K	D	P	N	G	D	V	R	N	W	A	A	F	A	I	N	I	N	K	Y	D	N	S	D	I	R	D	C	F	V	E	M	L	Q	D	K	N	E	E	V	R	I	E	A	I	I	G	L	S	Y	R	K	D	K	R	V	L	S	V	L	C	D	E	L	K	K	N	T	V	Y	D	D	I	I	E	A
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	I	X	V	P	L	L	S	R	G	L	N	E	R	E	T	G	I	K	R	K	S	A	V	I	I	D	N	X	C	K	L	V	E	D	P	Q	V	I	A	P	F	L	.	.	.	.	.	.	.	.	.	.	G	K	L	L	P	G	L	K	S	N	F	A	T	I	A	D	P	E	A	R	E	V	T	L	R	A
Template Known Secondary structure														T	S	S	S																T	T												.	.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.											.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		245	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	T	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions