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Job DescriptionP0ADK6
Confidence99.70%DateThu Jan 5 11:21:14 GMT 2012
Rank3Aligned Residues203
% Identity17%Templatec2db0B_
PDB info PDB header:protein bindingChain: B: PDB Molecule:253aa long hypothetical protein; PDBTitle: crystal structure of ph0542
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.. .......60.........70.........80.........90
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Query Sequence  NQCKKLNDDELFRLLDDHNSLKRISSARVLQLRGG. . . . . . . QDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDN
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Template Sequence  AKYDESVLKKLIELLDDDLWTVVKNAISIIMVIAKTREDLYEPMLKKLFSLLKKSEAIPLTQEIAKAFGQMAKEKPELVK
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SSGGG
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   27..30.........40.........50.........60.........70.........80.........90.........100......
 
   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  VFNILNNMALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVINDKATIPLLINLLKD
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Template Sequence  SMIPVLFANYRIGDEKTKINVSYALEEIAKANPMLMASIVRDFMSMLSSKNREDKLTALNFIEAMGEN. . . . . . . . . . . .
Template Known Secondary structure  TTT



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GGGG
SSTT

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   107..110.........120.........130.........140.........150.........160.........170....
 
   171........180.........190.........200.........210.........220.........230...... ...240........
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Query Sequence  PNGDVRNWAAFAININKYDNSDIRDCFVEMLQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNT. . VYDDIIEAAGEL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SFKYVNPFLPRIINLLHDGDEIVRASAVEALVHL
Template Known Secondary structure  ..............................................TGGGGGGG
S
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   175....180.........190.........200........
 
   249250 .........260.........270.........
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Query Sequence  GD. . . . . KTLLPVLDTMLYKFDDNEIITSAIDKLKR
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Template Sequence  ATLNDKLRKVVIKRLEEL. NDTSSLVNKTVKEGISR
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   209210.........220...... ...230.........240...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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