|   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
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. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
|
|  |  |  |
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |
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|  |
Query SS confidence |   |
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| . |
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Query Sequence |   |
N | Q | C | K | K | L | N | D | D | E | L | F | R | L | L | D | D | H | N | S | L | K | R | I | S | S | A | R | V | L | Q | L | R | G | G | . |
. |
. |
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Q | D | A | V | R | L | A | I | E | F | C | S | D | K | N | Y | I | R | R | D | I | G | A | F | I | L | G | Q | I | K | I | C | K | K | C | E | D | N |
Query Conservation |   |
  |   |   |   |   |   |   |
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|   |
|   |   |   |
|   |
|   |
|   |   |
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|   |   |
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|   |   |   |   |   | . | . | . | . | . | . | . |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
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|   |   |
|   |   |
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|   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
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| . | . | . | . | . | . | . |
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Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | K | Y | D | E | S | V | L | K | K | L | I | E | L | L | D | D | D | L | W | T | V | V | K | N | A | I | S | I | I | M | V | I | A | K | T | R | E | D | L | Y | E | P | M | L | K | K | L | F | S | L | L | K | K | S | E | A | I | P | L | T | Q | E | I | A | K | A | F | G | Q | M | A | K | E | K | P | E | L | V | K |
Template Known Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |
Template SS confidence |   |
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  |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
  |
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
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Query Sequence |   |
V | F | N | I | L | N | N | M | A | L | N | D | K | S | A | C | V | R | A | T | A | I | E | S | T | A | Q | R | C | K | K | N | P | I | Y | S | P | K | I | V | E | Q | S | Q | I | T | A | F | D | K | S | T | N | V | R | R | A | T | A | F | A | I | S | V | I | N | D | K | A | T | I | P | L | L | I | N | L | L | K | D |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
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| . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
S | M | I | P | V | L | F | A | N | Y | R | I | G | D | E | K | T | K | I | N | V | S | Y | A | L | E | E | I | A | K | A | N | P | M | L | M | A | S | I | V | R | D | F | M | S | M | L | S | S | K | N | R | E | D | K | L | T | A | L | N | F | I | E | A | M | G | E | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T | T |
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | G |
| S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
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  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | |
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  |
  |   |
171 | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | |
|
. | . | . | 240 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
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| . |
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Query Sequence |   |
P | N | G | D | V | R | N | W | A | A | F | A | I | N | I | N | K | Y | D | N | S | D | I | R | D | C | F | V | E | M | L | Q | D | K | N | E | E | V | R | I | E | A | I | I | G | L | S | Y | R | K | D | K | R | V | L | S | V | L | C | D | E | L | K | K | N | T | . |
. |
V | Y | D | D | I | I | E | A | A | G | E | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   | . | . |
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|   |   |
|   |   |
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|   |
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . |
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Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |
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|   |   |
|   |   |   |
|   |   |
|
Template Sequence |   |
. |
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S | F | K | Y | V | N | P | F | L | P | R | I | I | N | L | L | H | D | G | D | E | I | V | R | A | S | A | V | E | A | L | V | H | L |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T |  |  |  |  | G | G | G |  |  |  |  |  | G | G | G | G |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
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175 | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . |
  |
  |   |
249 | 250 | |
|
|
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|
. | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
| . |
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Query Sequence |   |
G | D | . |
. |
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. |
. |
K | T | L | L | P | V | L | D | T | M | L | Y | K | F | D | D | N | E | I | I | T | S | A | I | D | K | L | K | R |
Query Conservation |   |
|   | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |
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|   |
|
Alig confidence |   |
|
| . | . | . | . | . |
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| . |
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Template Conservation |   |
  |   |   |   |
|   |   |   |   |
|
|   |   |
|   |   |   |
| . |   |
|   |   |   |   |
|
|   |   |   |   |
|   |
|   |   |
Template Sequence |   |
A | T | L | N | D | K | L | R | K | V | V | I | K | R | L | E | E | L | . |
N | D | T | S | S | L | V | N | K | T | V | K | E | G | I | S | R |
Template Known Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  | T |
| . |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |
|
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
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209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | |
. | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
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