Job Description P0ADK6 Confidence 44.93% Date Thu Jan 5 11:21:14 GMT 2012 Rank 68 Aligned Residues 104 % Identity 17% Template c1vsy5_ PDB info PDB header:hydrolase Chain: 5: PDB Molecule:proteasome activator blm10; PDBTitle: proteasome activator complex Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.																	.	.	.	70	.	.
Predicted Secondary structure																			.																					.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																					.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	L	Y	N	Q	C	K	K	L	N	D	D	E	L	F	R	.	L	L	D	D	H	N	S	L	K	R	I	S	S	A	R	V	L	Q	L	R	.	.	.	.	G	G	Q	D	A	V	R	L	A	I	E	F	C	S	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Y	I	R	R	D
Query Conservation																			.																					.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																					.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	L	T	E	E	E	K	N	K	I	L	E	F	V	V	S	N	L	Y	N	E	Q	F	V	E	V	R	V	R	A	A	S	I	L	S	D	I	V	H	N	W	K	E	E	Q	P	L	L	S	L	I	E	R	F	A	K	G	L	D	V	N	K	Y	T	S	K	E	R	Q	K	L	S	K	T	D	I	K	I	H
Template Known Secondary structure		T	T	S		T	T					T					T	T	T	T	T		S	S																		S			S												T	T	S	S	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		1980	.	.	.	.	.	.	.	.	.	1990	.	.	.	.	.	.	.	.	.	2000	.	.	.	.	.	.	.	.	.	2010	.	.	.	.	.	.	.	.	.	2020	.	.	.	.	.	.	.	.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.
Query Sequence		I	G	A	F	I	L	G	Q	I	K	I	C	K	K	C	.	.	.	.	.	.	E	D	N	V	F	N	I	L	N	N	M	A	L	N	D	K	S	A	C	V	R	A	T	A	I	E	S	T	A	Q	R
Query Conservation																	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.																	.
Template Conservation																																							.
Template Sequence		G	N	V	L	G	L	G	A	I	I	S	A	F	P	Y	V	F	P	L	P	P	W	I	P	K	N	L	S	N	L	S	S	W	A	R	T	S	.	G	M	T	G	N	A	A	K	N	T	I	S	E	F
Template Known Secondary structure												T	T		S			S	S			T											T	T	S	S	S		.	S	S					T
Template Predicted Secondary structure																																							.
Template SS confidence
		2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.		.	.	.	2100	.	.	.	.	.	.	.	.	.	2110

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions