 |
| Job Description | P52134 | | Confidence | 1.20% | Date | Thu Jan 5 12:05:40 GMT 2012 |
| Rank | 93 | Aligned Residues | 25 |
| % Identity | 16% | Template | d2cjra1 |
| SCOP info | Nucleocapsid protein dimerization domain
| Nucleocapsid protein dimerization domain
| Coronavirus nucleocapsid protein
|
| Resolution | 2.50 |
|
|   |   |
16 | . | . | . | 20 | . | . | . | . | |
|
|
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 |
| Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | N | K | T | G | V | S | D | S | . |
. |
. |
L | T | A | L | T | L | A | T | V | A | A | L | L | T | G | G |
| Query Conservation |   |
|   |
|
|
|
|
|
|
| . | . | . |
|   |   |
|   |   |
|
|
|
|   |
|
|
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|   |
|
|   |
|   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|   |
|
|
|
|
| Template Sequence |   |
L | I | R | Q | G | T | D | Y | K | H | W | P | Q | I | A | Q | F | A | P | S | A | S | A | F | F | G | M | S |
| Template Known Secondary structure |   |
 |  |  |  | G | G | G | S | T | T |  |  |  |  |  | T | T | S |
|
|  |  |  |  |  |  | T | S |
| Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
292 | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|