Return to main results Retrieve Phyre Job Id

Job DescriptionP52134
Confidence2.85%DateThu Jan 5 12:05:40 GMT 2012
Rank32Aligned Residues12
% Identity58%Templatec2jpxA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:vpu protein; PDBTitle: a18h vpu tm structure in lipid bilayers
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.....
Predicted Secondary structure 
Query SS confidence 











Query Sequence  IAIIAIVIIVII
Query Conservation 



 






Alig confidence 











Template Conservation 











Template Sequence  IAIVALVVAIII
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 











   6...10.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions