Return to main results Retrieve Phyre Job Id

Job DescriptionP52134
Confidence6.88%DateThu Jan 5 12:05:40 GMT 2012
Rank20Aligned Residues46
% Identity15%Templatec2i88A_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:colicin-e1; PDBTitle: crystal structure of the channel-forming domain of colicin2 e1
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.......
Predicted Secondary structure 





Query SS confidence 













































Query Sequence  TVAALLTGGGAAGAASVALTPFVGVPVGIFVGIYVFAKVVRLISGK
Query Conservation 


 



 
 

 







 




 



 




 
  
  
Alig confidence 













































Template Conservation    


 

  

   
  

  
   


 
 
 
 
 
 
 

  
Template Sequence  TLEKKAADAGVSYVVALLFSLLAGTTLGIWGIAIVTGILCSYIDKN
Template Known Secondary structure  GGGTT



SS

Template Predicted Secondary structure 
Template SS confidence 













































   466...470.........480.........490.........500.........510.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions