Job Description P0A6U3 Confidence 99.04% Date Thu Jan 5 11:03:55 GMT 2012 Rank 186 Aligned Residues 159 % Identity 21% Template d3coxa1 SCOP info FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD-linked reductases, N-terminal domain Resolution 1.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	F	D	V	I	I	I	G	G	G	H	A	G	T	E	A	A	M	A	A	A	R	M	G	Q	Q	T	L	L	L	T	H	N	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	V	P	A	L	V	I	G	S	G	Y	G	G	A	V	A	A	L	R	L	T	Q	A	G	I	P	T	Q	I	V	E	M	G	R	S	W	D	T	P	G	S	D	G	K	I	F	C	G	M	L	N	P	D	K	R	S	M	W	L	A	D	K	T	D	Q	P	V	S	N	F	M	G	F	G	I	N	K	S	I
Template Known Secondary structure												S													T	T								S	S			S		S			T	T	S		S	S			S	S	S			T	T	S	B	B	S		S	B				S	S		S	B	T	T	B	S				B
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
																								41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.											.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	G	Q	M	S	C	N	P	A	I	G	G	I	G	K	G	H	L	V	K	.	.	.	.	.	.	.	.	.	.	E	V	D	A	L	G	G	L	M	A	K	A	I	D	Q	A	G	I	Q	F	R	I	L	N	A	S	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	Y	V	G	V	L	D	S	E	R	F	S	G	I	K	V	Y	Q	G	R	G	V	G	G	G	S	L	V	N	G	G	M	A	V	T	P	K	R	N	Y	F	E	E	I	L	P	S	V	D	S	N	E	M	Y	N	K	Y	F	P	R	A	N	T	G	L	G	V	N	N	I	D	Q	A	W	F	E	S	T	E
Template Known Secondary structure					B		S							S	S								S	T	T	G	G	G	G	T	S			B														T	T	S								T										T		B											G
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
																	89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																													.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	A	V	R	A	T	R	A	Q	A	D	R	V	L	Y	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	R	T	A	L	E	N	Q	P	N	L	M	I	F	.	Q	Q	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		W	Y	K	F	A	R	T	G	R	K	T	A	Q	R	S	G	F	T	T	A	F	V	P	N	V	Y	D	F	E	Y	M	K	K	E	A	A	G	Q	V	T	K	S	G	L	G	G	E	V	I	Y	G	N	N	A	G	K	K	S	L	D	K	T	Y	L	A	Q	A	A	A	T	G	K	L	T	I	T	T	L	H	R
Template Known Secondary structure		G	G													T	T								B	S	B										T	T	S	S			S	T	T	T	T		S	T	T			S	S	S	B			G	G	G	T								T	T							S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.										.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.
Query Sequence		V	E	D	L	I	V	E	N	D	R	V	V	G	A	V	T	Q	.	.	.	.	.	.	.	.	.	M	G	L	K	F	R	A	K	A	V	V	L	T	V	G	T	F	L	D	G	K	I
Query Conservation																			.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	K	V	A	P	A	T	G	S	G	Y	S	V	T	M	E	Q	I	D	E	Q	G	N	V	V	A	T	K	V	V	T	A	D	R	V	F	F	A	A	G	S	V	G	T	S	K	L
Template Known Secondary structure									S	S	S	S										T	T	S																	S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions