Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6U3
Confidence99.50%DateThu Jan 5 11:03:55 GMT 2012
Rank73Aligned Residues158
% Identity23%Templated1neka2
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50. .......
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Query Sequence  YPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAI. . . . . . . . . . . . . . . . . . . . . . . . GGIGKGH
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Template Sequence  PVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQD
Template Known Secondary structure 
S


STT



SS
GGGSGGGG

S




SSS


TS
S
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   5960.........70.........80.... .....90.........100.........110.........120..
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Query Sequence  LVKEVDALGGLMAKAIDQAGIQFRIL. . . . . . . . . . . . . . . . NASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQ
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Template Conservation                                                                                  
Template Sequence  AIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSE
Template Known Secondary structure  TT



B
S
BTTB


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TTSSS

TT
TT

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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   123......130. ........ 140.........150.........160
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Query Sequence  QAVEDLIVE. NDRVVGAV. . . . . TQMGLKFRAKAVVLTVGTFLD
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Template Sequence  WYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGR
Template Known Secondary structure 
TTS
TTT

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GG
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   164.....170.........180.........190.........200.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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