Job Description P0A6U3 Confidence 99.91% Date Thu Jan 5 11:03:55 GMT 2012 Rank 19 Aligned Residues 357 % Identity 16% Template c3v76A_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:flavoprotein; PDBTitle: the crystal structure of a flavoprotein from sinorhizobium meliloti Resolution 2.51 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.							.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70										.	.
Predicted Secondary structure																																					.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Query Sequence		D	V	I	I	I	G	G	G	H	A	G	T	E	A	A	M	A	A	A	R	M	G	Q	Q	T	L	L	L	T	H	N	I	D	T	L	.	.	.	.	.	.	G	Q	M	S	C	N	P	A	I	G	G	I	G	K	G	H	L	V	K	E	V	D	A	L	G	G	L	M	.	.	.	.	.	.	.	.	.	A	K
Query Conservation																																					.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	V	I	I	G	A	G	A	A	G	X	X	C	A	I	E	A	G	K	R	G	R	R	V	L	V	I	D	H	A	R	A	P	G	E	K	I	R	I	S	G	G	G	R	C	N	F	T	N	I	H	A	S	P	R	N	F	L	S	G	N	P	H	F	C	K	S	A	L	A	R	Y	R	P	Q	D	F	V	A
Template Known Secondary structure									S													T	T								S	S	S	S	S							S	G	G	G	T						T	T		S	G	G	G				S	S	T	T	T	T							S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	D	Q	A	G	I	Q	F	R	I	L	N	A	S	K	G	P	A	V	R	A	T	R	A	Q	A	D	R	V	L	Y	R	Q	A	V	R	T	A	L	E	N	Q	P	N	L	M	I	F	Q	Q	A	V	E	D	L	I	V	E	N	D	R	V	V	G	A	V	T	Q	M	G	L	K	F	R	A	K	A	V	V
Query Conservation
Alig confidence																							.	.	.	.	.	.																																					.	.
Template Conservation																							.	.	.	.	.	.																																					.	.
Template Sequence		L	V	E	R	H	G	I	G	W	H	E	K	T	L	G	Q	L	F	C	D	H	.	.	.	.	.	.	S	A	K	D	I	I	R	X	L	X	A	E	X	K	E	A	G	V	Q	L	R	L	E	T	S	I	G	E	V	E	R	T	A	S	G	F	.	.	R	V	T	T	S	A	G	T	V	D	A	A	S	L	V
Template Known Secondary structure						T	T							S	T	T					S	S	.	.	.	.	.	.																	T						S										T	T			.	.					T	T						S
Template Predicted Secondary structure																							.	.	.	.	.	.																																					.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.							.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	V	G	T	F	L	D	G	K	I	H	I	G	L	D	N	Y	S	G	G	R	A	G	D	P	P	S	I	P	L	S	R	R	L	R	E	L	P	L	R	V	G	R	L	K	T	G	T	P	P	R	I	D	A	R	T	I	D	F	S	V	L	A	Q	Q	H	G	D	N	P	M	P	V	F	S	F	M	G	N
Query Conservation
Alig confidence																																					.	.
Template Conservation																																					.	.
Template Sequence		V	A	S	G	G	K	S	I	P	K	X	G	A	T	G	L	A	Y	R	I	A	E	Q	F	G	L	P	V	V	E	T	R	P	A	L	.	.	V	P	L	T	L	D	Q	A	Q	L	A	K	L	G	A	L	A	G	V	A	A	D	A	E	A	R	F	G	K	A	A	F	R	E	A	V	L	I	T	H	R	G	L
Template Known Secondary structure							S	S		G	G	G	T												T	T										S	.	.													T	G	G	G	T	T										T	T											S	S
Template Predicted Secondary structure																																					.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	Q	H	P	Q	Q	V	P	C	Y	I	T	H	T	N	E	K	T	H	D	V	I	R	S	N	L	D	R	S	P	M	Y	A	G	V	I	E	G	V	G	P	R	Y	C	P	S	I	E	D	K	V	M	R	F	A	D	R	N	Q	H	Q	I	F	L	E	P	E	G	L	T	S	N	E	I	Y	P	N	G	I
Query Conservation
Alig confidence														.	.	.	.																																																											.	.	.	.	.	.
Template Conservation														.	.	.	.																																																											.	.	.	.	.	.
Template Sequence		S	G	P	A	I	L	Q	I	S	S	Y	W	.	.	.	.	R	E	G	E	E	I	V	L	R	L	X	P	D	I	D	I	A	S	I	L	K	G	X	R	R	A	N	G	R	Q	A	V	Q	T	A	L	A	D	I	L	P	R	R	L	A	Q	F	F	A	D	E	A	K	L	T	G	R	X	.	.	.	.	.	.
Template Known Secondary structure			S							T	T	T		.	.	.	.		T	T								S	T	T	S													T		S	S	B						T	T	T	S												T	T		T	T		B	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.																																																											.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.											330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.							.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.
Query Sequence		S	T	S	L	P	F	D	V	Q	M	Q	I	V	R	S	M	Q	.	.	.	.	.	.	.	.	.	.	G	M	E	N	A	K	I	V	R	P	G	Y	A	I	E	Y	D	F	F	D	P	R	D	L	K	P	T	L	E	S	K	F	I	Q	G	L	F	F	A	G	Q	I	.	.	.	.	.	.	N	G	T	T	G
Query Conservation																			.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.												.	.										.	.	.	.																	.	.	.	.	.	.
Template Conservation																																								.	.										.	.	.	.
Template Sequence		L	A	D	L	S	D	K	T	I	D	A	L	A	S	S	I	Q	V	W	A	V	K	P	A	G	S	E	G	Y	R	T	A	E	V	T	L	G	G	.	.	V	D	T	R	A	L	D	S	R	.	.	.	.	T	X	Q	A	K	E	V	P	G	L	Y	F	V	G	E	C	V	D	V	T	G	W	L	G	G	Y	N
Template Known Secondary structure		G	G	G															S											T	T	T		S						.	.			G	G	G	B		T	T	.	.	.	.	T		B	B	T	T	S	T	T					G	G	G	B	S					S	S	S
Template Predicted Secondary structure																																								.	.										.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.			.	.	.	.	.	350	.	.	.					.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		377	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	E	A	A	A	Q	G	L	L	A	G	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Q	W	A	W	A	S	G	F	V	A	G	Q	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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