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Job DescriptionP0A6U3
Confidence99.68%DateThu Jan 5 11:03:55 GMT 2012
Rank34Aligned Residues290
% Identity17%Templatec3fbsB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:oxidoreductase; PDBTitle: the crystal structure of the oxidoreductase from agrobacterium2 tumefaciens
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILN
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Template Sequence  KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  ASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHI
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Template Sequence  . . . . SHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFI. VEIDGGRRETAGRLILAMGVTDELPEIA
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   166...170.........180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  GLDNYSGGRAGDPPSIPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYIT
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Template Sequence  GLRERWGSAVFHCPYCHG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YELDQGKIGVIAASPMAIHHA
Template Known Secondary structure  TSGGGBTTTS
T.........................................GGGT

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   119120.........130...... ...140.........150.......
 
   246...250.........260.........270.........280.........290.........300.........310.........320.....
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Query Sequence  HTNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIV
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Template Sequence  LMLPDWGETTFFTNGIVEPDADQHALLAARGVRVETTRIREIAGHADVVLADGRSIALAGLFTQPKLRITVDWIEKL. . .
Template Known Secondary structure  GGGT
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   158.160.........170.........180.........190.........200.........210.........220.........230....
 
   326...330.........340.........350.........360.........370... ......380.........390......
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Query Sequence  RSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLFFAGQING. TTGYEEAAAQGLLAGLNAARLSA
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Template Sequence  . . . . GCAVEEGPMGSTIV. . . . TDP. . . . . MKQT. TARGIFACGDVARPAGSVALAVGDGAMAGAAAHRSIL
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   235....240........ .250. .... ....260.........270.........280.........290..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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