Job Description P0A6U3 Confidence 98.96% Date Thu Jan 5 11:03:55 GMT 2012 Rank 196 Aligned Residues 162 % Identity 29% Template c2jbvA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:choline oxidase; PDBTitle: crystal structure of choline oxidase reveals insights into2 the catalytic mechanism Resolution 1.86 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40
Predicted Secondary structure																												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	Y	P	D	P	F	D	V	I	I	I	G	G	G	H	A	G	T	E	A	A	M	A	A	A	R	.	M	G	Q	Q	T	L	L	L	T	H	N	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	D	R	E	F	D	Y	I	V	V	G	G	G	S	A	G	A	A	V	A	A	R	L	S	E	D	P	A	V	S	V	A	L	V	E	A	G	P	D	D	R	G	V	P	E	V	L	Q	L	D	R	W	M	E	L	L	E	S	G	Y	D	W	D	Y	P	I	E	P	Q	E	N	G	N	S	F	M	R	H	A
Template Known Secondary structure															S											T	T	S	T	T	S							S	S				T	T						B	G	G	G	G	G	G	G	T	T	S	T	T	B					B				S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
						41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																																																	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	T	L	G	Q	M	S	C	N	P	A	I	G	G	I	G	K	G	H	L	V	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	A	L	G	G
Query Conservation		.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	K	V	M	G	G	C	S	S	H	N	S	C	I	A	F	W	A	P	R	E	D	L	D	E	W	E	A	K	Y	G	A	T	G	W	N	A	E	A	A	W	P	L	Y	K	R	L	E	T	N	E	D	A	G	P	D	A	P	H	H	G	D	S	G	P	V	H	L	M	N	V	P	P	K	D	P	T	G	V
Template Known Secondary structure			B		S	T	T	G	G	G	G	T	S			B															T	T			T	T		S															T	T		B	T	T	B	T	T	S		B	S		S								S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.							100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140
Predicted Secondary structure																																	.	.	.	.	.	.																								.											.
Query SS confidence																																	.	.	.	.	.	.																								.											.
Query Sequence		L	M	A	K	A	I	D	Q	A	G	I	Q	F	R	I	L	N	A	S	K	G	P	A	V	R	A	T	R	A	Q	A	.	.	.	.	.	.	D	R	V	L	Y	R	Q	A	V	R	T	A	L	E	N	Q	P	N	L	M	I	F	Q	.	Q	A	V	E	D	L	I	V	E	N	.	D	R	V	V	G	A	V	T
Query Conservation																																	.	.	.	.	.	.																								.											.
Alig confidence																																	.	.	.	.	.	.																								.											.
Template Conservation
Template Sequence		A	L	L	D	A	C	E	Q	A	G	I	P	R	A	K	F	N	T	G	T	T	V	V	N	G	A	N	F	F	Q	I	N	R	R	A	D	G	T	R	S	S	S	S	V	S	Y	I	H	P	I	V	E	Q	E	N	F	T	L	L	T	G	L	R	A	R	Q	L	V	F	D	A	D	R	R	C	T	G	V	D	I
Template Known Secondary structure										T	T			B			S	S	S	S	S			S	S									B		T	T	S	B	B								T	G	G	G	T	T		T	T						S										T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		141	.	.							.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure					.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.
Query Sequence		Q	M	G	.	.	.	.	.	.	L	K	F	R	A	K	A	V	V	L	T	V	G	T	F	L	D	G	K	I
Query Conservation					.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	S	A	F	G	H	T	H	R	L	T	A	R	N	E	V	V	L	S	T	G	A	I	D	T	P	K	L
Template Known Secondary structure			S	S	T	T	S															S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions