Job Description P0A6U3 Confidence 99.97% Date Thu Jan 5 11:03:55 GMT 2012 Rank 7 Aligned Residues 375 % Identity 19% Template c2i0zA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nad(fad)-utilizing dehydrogenases; PDBTitle: crystal structure of a fad binding protein from bacillus2 cereus, a putative nad(fad)-utilizing dehydrogenases Resolution 1.84 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.							.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.												.	.
Predicted Secondary structure																																							.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	F	D	V	I	I	I	G	G	G	H	A	G	T	E	A	A	M	A	A	A	R	M	G	Q	Q	T	L	L	L	T	H	N	I	D	T	L	.	.	.	.	.	.	G	Q	M	S	C	N	P	A	I	G	G	I	G	K	G	H	L	V	K	E	V	D	A	L	.	.	.	.	.	.	.	.	.	.	.	G	G
Query Conservation																																							.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	Y	D	V	I	V	I	G	G	G	P	S	G	L	M	A	A	I	G	A	A	E	E	G	A	N	V	L	L	L	D	K	G	N	K	L	G	R	K	L	A	I	S	G	G	G	R	C	N	V	T	N	R	L	P	L	D	E	I	V	K	H	I	P	G	N	G	R	F	L	Y	S	A	F	S	I	F	N	N	E
Template Known Secondary structure				S							S													T	T								S	S	S	S	S							T	G	G	G	T							S								T		T	B	T	G	G	G	G							S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	A	K	A	I	D	Q	A	G	I	Q	F	R	I	L	N	A	S	K	G	P	A	V	R	A	T	R	A	Q	A	D	R	V	L	Y	R	Q	A	V	R	T	A	L	E	N	Q	P	N	L	M	I	F	Q	Q	A	V	E	D	L	I	V	E	N	D	R	V	V	G	A	V	T	Q	M	G	L	K	F	R	A
Query Conservation
Alig confidence																										.	.	.	.	.
Template Conservation																										.	.	.	.	.
Template Sequence		D	I	I	T	F	F	E	N	L	G	V	K	L	K	E	E	D	H	G	R	M	F	P	V	.	.	.	.	.	S	N	K	A	Q	S	V	V	D	A	L	L	T	R	L	K	D	L	G	V	K	I	R	T	N	T	P	V	E	T	I	E	Y	E	N	G	Q	T	K	A	V	I	L	Q	T	G	E	V	L	E	T
Template Known Secondary structure										T	T							G	G	G					T	.	.	.	.	.	T																	T	T						S										T	T								T	T
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	V	V	L	T	V	G	T	F	L	D	G	K	I	H	I	G	L	D	N	Y	S	G	G	R	A	G	D	P	P	S	I	P	L	S	R	R	L	R	E	L	P	L	R	V	G	R	L	K	T	G	T	P	P	R	I	D	A	R	T	I	D	F	S	V	L	A	Q	Q	H	G	D	N	P	M	P	V	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	H	V	V	I	A	V	G	G	K	S	V	P	Q	T	G	S	T	G	D	G	Y	A	W	A	E	K	A	G	H	T	I	T	E	L	F	P	T	E	V	P	I	L	S	N	E	P	F	I	R	D	R	S	L	Q	G	L	A	L	R	D	I	N	L	S	V	L	N	A	I	I	S	H	K	M	D	M	L	F	T
Template Known Secondary structure		S									S	S	S	G	G	G	S		S	S									T	T										S												T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.								.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																												.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.
Query Sequence		F	M	G	N	A	S	Q	H	P	Q	Q	V	P	C	Y	I	T	H	T	N	E	K	T	H	D	V	.	.	.	.	.	.	.	I	R	S	N	L	D	R	S	P	M	Y	A	G	V	I	E	G	V	G	P	R	Y	C	P	S	I	E	D	K	V	M	R	F	A	D	R	N	Q	H	Q	I	F	L	E	P	E	G
Query Conservation																												.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	F	G	L	S	G	P	A	A	L	R	C	S	Q	F	V	V	K	A	L	K	K	F	K	T	N	T	I	Q	M	S	I	D	A	L	P	E	E	N	S	E	Q	L	F	Q	R	M	L	K	Q	M	K	E	D	P	K	K	G	I	K	N	V	L	K	G	Y	V	P	E	R	Y	F	L	F	L	L	E	K	N	E
Template Known Secondary structure		S	S				S																				S								S		T	T	S														T	T	S	T	T	S	B					T	T	T	S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.											330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	S	N	E	I	Y	P	N	G	I	S	T	S	L	P	F	D	V	Q	M	Q	I	V	R	S	M	Q	.	.	.	.	.	.	.	.	.	.	G	M	E	N	A	K	I	V	R	P	G	Y	A	I	E	Y	D	F	F	D	P	R	D	L	K	P	T	L	E	S	K	F	I	Q	G	L	F	F	A	G	Q	I
Query Conservation																														.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.												.	.										.	.	.	.
Template Conservation				.	.	.	.	.																																											.	.										.	.	.	.
Template Sequence		I	D	.	.	.	.	.	G	S	E	Q	A	G	Q	V	S	H	E	K	I	R	A	L	V	K	D	F	K	E	F	T	V	N	V	N	G	T	Q	S	I	E	K	A	F	V	T	G	G	G	.	.	V	S	V	K	E	I	N	P	K	.	.	.	.	E	M	S	S	K	F	T	N	G	L	Y	F	C	G	E	V
Template Known Secondary structure				.	.	.	.	.	T	T	S	B	G	G	G	S																									G	G	G		S	S					.	.			G	G	G			T	T	.	.	.	.	T	T			S	S	S	B	T					G	G	G
Template Predicted Secondary structure				.	.	.	.	.																																											.	.										.	.	.	.
Template SS confidence
		321	.						.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.			.	.	.	.	.	370	.	.	.					.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		372	.	.	.	.							.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.
Query Sequence		N	G	T	T	G	.	.	.	.	.	.	Y	E	E	A	A	A	Q	G	L	L	A	G	L	N	A	A	R	L	S	A
Query Conservation							.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	I	H	G	Y	T	G	G	Y	N	I	T	S	A	L	V	T	G	R	I	A	G	T	T	A	G	E	N	A	K
Template Known Secondary structure		B	S		B			T	T	T
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420