Job Description P0A6U3 Confidence 99.02% Date Thu Jan 5 11:03:55 GMT 2012 Rank 188 Aligned Residues 287 % Identity 12% Template c2gr2A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ferredoxin reductase; PDBTitle: crystal structure of ferredoxin reductase, bpha4 (oxidized form) Resolution 1.85 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		P	F	D	V	I	I	I	G	G	G	H	A	G	T	E	A	A	M	A	A	A	R	M	G	Q	Q	.	.	T	L	L	L	T	H	N	I	D	T	L	G	Q	M	S	C	N	P	A	I	G	G	I	G	K	G	H	L	V	K	E	V	D	A	L	G	G	L	M	A	K	A	I	D	Q	A	G	I	Q	F	R	I
Query Conservation																												.	.
Alig confidence																												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	P	V	V	V	L	G	A	G	L	A	S	V	S	F	V	A	E	L	R	Q	A	G	Y	Q	G	L	I	T	V	V	G	D	E	A	E	R	P	Y	D	R	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	S							S														T			S							S	S		S			B		S	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	A	S	K	G	P	A	V	R	A	T	R	A	Q	A	D	R	V	L	Y	R	Q	A	V	R	T	A	L	E	N	Q	P	N	L	M	I	F	Q	Q	A	V	E	D	L	I	V	E	N	D	R	V	V	G	A	V	T	Q	M	G	L	K	F	R	A	K	A	V	V	L	T	V	G	T	F	L	D	G	K	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																																										.	.	.																				.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																										.	.	.																				.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	L	S	K	D	F	M	A	H	G	D	A	E	K	I	R	L	D	C	K	R	A	P	E	V	E	W	L	L	G	V	T	A	Q	S	F	D	P	Q	A	H	T	.	.	.	V	A	L	S	D	G	R	T	L	P	Y	G	T	L	V	L	A	T	G	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	G	G	T								G	G	G	S	B				T	T	S		S						T								T	T	T	T		.	.	.				T	T	S						S								.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																										.	.	.																				.	.	.	.	.	.	.
Template SS confidence
												51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	G	L	D	N	Y	S	G	G	R	A	G	D	P	P	S	I	P	L	S	R	R	L	R	E	L	P	L	R	V	G	R	L	K	T	G	T	P	P	R	I	D	A	R	T	I	D	F	S	V	L	A	Q	Q	H	G	D	N	P	M	P	V	F	S	F	M	G	N	A	S	Q	H	P	Q	Q	V	P	C	Y
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	A	A	P	R	A	L	P	T	L	Q	G	A	T	M	P	V	H	T	L	R	T	L	E	D	A	R	R	I	Q	A	G	L	R	P	Q	S	R	L	L	I	V	G	G	G	V	I	G	L	E	L	A	A	T	A	R	T	A	G	V	H	V	S	L	V	E	T	Q	P	R	L	M	S	R	A	A	P	A	T
Template Known Secondary structure		.	.							G	G	G	T	T		S	S						S	S									T	T			T	T									S													T	T								S	S	S	S	S		T	T	T	S
Template Predicted Secondary structure		.	.
Template SS confidence
				111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	H	T	N	E	K	T	H	D	V	I	R	S	N	L	D	R	S	P	M	Y	A	G	V	I	E	G	V	G	P	R	Y	C	P	S	I	E	D	K	V	M	R	F	A	D	R	N	Q	H	Q	I	F	L	E	P	E	G	L	T	S	N	E	I	Y	P	N	G	I	S	T	S	L	P	F	D	V	Q	M	Q
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Sequence		L	A	D	F	V	A	R	Y	H	A	A	Q	G	V	D	L	R	F	E	R	S	V	T	G	S	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	V	L	L	D	D	G	T	R	I	A	A	D	M	V	V	V	G	I	G	V	L	A	N	D	A	L	.
Template Known Secondary structure													T	T						T								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					T	T	S						S						S									.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.																									.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.												.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	R	S	M	Q	G	M	E	N	A	K	I	V	R	P	G	Y	A	I	E	Y	D	F	F	D	P	R	D	L	K	P	T	L	E	S	K	F	I	Q	G	L	F	F	A	G	Q	I	N	G	T	T	.	.	.	.	.	.	.	.	.	.	.	G	Y	E	E	A	A	A	Q	G	L	L	A	G	L	N	A	A
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.														.	.	.	.				.	.	.	.	.					.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.														.	.	.	.				.	.	.	.	.					.
Template Sequence		.	.	.	.	.	.	.	A	R	A	A	G	L	A	C	D	D	G	I	F	.	.	.	.	V	D	A	.	.	.	.	.	Y	G	R	T	.	T	C	P	D	V	Y	A	L	G	D	V	T	R	Q	R	N	P	L	S	G	R	F	E	R	I	E	T	W	S	N	A	Q	N	Q	G	I	A	V	A	R	H	L	V
Template Known Secondary structure		.	.	.	.	.	.	.					T			B	S	S	S			.	.	.	.			T	.	.	.	.	.	T		B		.	S	S	T	T					G	G	G						T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.														.	.	.	.				.	.	.	.	.					.
Template SS confidence
									244	.	.	.	.	.	250	.	.	.	.	.	.					.	.	.						260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions