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Job DescriptionP0A6U3
Confidence99.12%DateThu Jan 5 11:03:55 GMT 2012
Rank176Aligned Residues145
% Identity24%Templatec1ps9A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:2,4-dienoyl-coa reductase; PDBTitle: the crystal structure and reaction mechanism of e. coli 2,4-2 dienoyl coa reductase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  PDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRI
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Template Sequence  VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKE. . . . . . EFYETLRYYRRMIEVTGVTLKL
Template Known Secondary structure  SS



STTT
SSSSS
TTTTSTT
T......TT
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   371........380.........390.........400.........410.........420.. .......430.........440....
 
   84.....90.........
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Query Sequence  LNASKGPAVRATRAQA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  NHTVTADQLQAFDETILASGIVPRTPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNI
Template Known Secondary structure  S



SSSS

SS







BTTTSTTTS




S

T

SS
GGG
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   445....450.........460.........470.........480.........490.........500.........510.........520....
 
   100.........110.........120.........130...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DRVLYRQAVRTALENQPNLMIFQQAVEDLIVEND
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Template Sequence  AGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKI. . DDD
Template Known Secondary structure  TTB
TT

SGGGB
TT






SS
SS
S
TTTTS
TTTTT

S
..TT
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   525....530.........540.........550.........560.........570.........580.........590......... 600..
 
   134.....140.........150......
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Query Sequence  RVVGAVTQMGLKFRAKAVVLTVG
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Template Sequence  GLHVVINGETQVLAVDNVVICAG
Template Known Secondary structure  TT

S


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   603......610.........620.....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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