Job Description P0A6U3 Confidence 98.98% Date Thu Jan 5 11:03:55 GMT 2012 Rank 194 Aligned Residues 162 % Identity 20% Template c1gpeA_ PDB info PDB header:oxidoreductase(flavoprotein) Chain: A: PDB Molecule:protein (glucose oxidase); PDBTitle: glucose oxidase from penicillium amagasakiense Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40
Predicted Secondary structure																														.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	Y	P	D	P	F	D	V	I	I	I	G	G	G	H	A	G	T	E	A	A	M	A	A	A	R	M	G	.	Q	Q	T	L	L	L	T	H	N	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																														.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	G	K	T	Y	D	Y	I	I	A	G	G	G	L	T	G	L	T	V	A	A	K	L	T	E	N	P	K	I	K	V	L	V	I	E	K	G	F	Y	E	S	N	D	G	A	I	I	E	D	P	N	A	Y	G	Q	I	F	G	T	T	V	D	Q	N	Y	L	T	V	P	L	I	N	N	R	T	N	N	I	K
Template Known Secondary structure		T	T	T											S												T	S	T	T								S	S				T	T	S							G	G	G	T	T	T	T	T	T	S	T	T	B									T	T	S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
						41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	T	L	G	Q	M	S	C	N	P	A	I	G	G	I	G	K	G	H	L	V	K	E	V	D	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	K	G	L	G	G	S	T	L	I	N	G	D	S	W	T	R	P	D	K	V	Q	I	D	S	W	E	K	V	F	G	M	E	G	W	N	W	D	N	M	F	E	Y	M	K	K	A	E	A	A	R	T	P	T	A	A	Q	L	A	A	G	H	S	F	N	A	T	C	H	G	T	N	G	T	V	Q	S	G	A
Template Known Secondary structure			B		S	T	T	G	G	G	G	T	S																		T	T			T	T		S											T														T					G	G	G			B	S	S	S				B
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
												67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.																									.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.																									.
Query Sequence		.	.	.	.	.	.	.	.	.	.	G	G	L	M	A	K	A	I	D	Q	A	G	I	Q	F	R	I	L	N	A	S	K	G	P	A	V	R	A	T	R	A	Q	A	.	.	.	.	.	D	R	V	L	Y	R	Q	A	V	R	T	A	L	E	N	Q	P	N	L	M	I	F	Q	Q	.	A	V	E	D	L	I	V
Query Conservation		.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.																									.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.																									.
Template Conservation
Template Sequence		R	D	N	G	Q	P	W	S	P	I	M	K	A	L	M	N	T	V	S	A	L	G	V	P	V	Q	Q	D	F	L	C	G	H	P	R	G	V	S	M	I	M	N	N	L	D	E	N	Q	V	R	V	D	A	A	R	A	W	L	L	P	N	Y	Q	R	S	N	L	E	I	L	T	G	Q	M	V	G	K	V	L	F
Template Known Secondary structure					S	S		B		T												T	T			B	S			T	T	S	S											S	B		T	T			B								T	T	T	T	T	T		T	T						S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		131	.	.					.	.	.	.	.	.			140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure					.	.	.	.							.	.									.	.	.
Query SS confidence					.	.	.	.							.	.									.	.	.
Query Sequence		E	N	D	.	.	.	.	R	V	V	G	A	V	.	.	T	Q	M	G	L	K	F	R	.	.	.	A	K	A	V	V	L	T	V	G	T	F	L	D	G	K	I
Query Conservation					.	.	.	.							.	.									.	.	.
Alig confidence					.	.	.	.							.	.									.	.	.
Template Conservation
Template Sequence		K	Q	T	A	S	G	P	Q	A	V	G	V	N	F	G	T	N	K	A	V	N	F	D	V	F	A	K	H	E	V	L	L	A	A	G	S	A	I	S	P	L	I
Template Known Secondary structure					T	T													T	T															S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions