 |
Job Description | P40876 | Confidence | 97.22% | Date | Thu Jan 5 12:01:18 GMT 2012 |
Rank | 21 | Aligned Residues | 109 |
% Identity | 18% | Template | d1grwa_ |
SCOP info | Immunoglobulin-like beta-sandwich
| PapD-like
| MSP-like
|
Resolution | 2.6 |
|
 |
  |   |
26 | . | . | . | 30 | . | . | . | . | |
. | . | . | . | . | |
|
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|  |  | . |  |  |  |
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | V | V | V | G | G | T | R | . |
F | I | F | P | A | . |
. |
. |
D | R | E | S | I | S | I | L | L | T | N | T | S | Q | E | S | W | L | I | N | S | K | I | N | R | P | T | R | W | A | G | G | E | A | S | T | V | P | A | P | L | L | A | A | P | P | L | I | L | L | K | P | G | T | T | G | T | L | R | L | L | R |
Query Conservation |   |
|   |
|   |
|   |   |
|
| . |
|
|   |   |   | . | . | . |   |   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |   |
|   |
|   |   |   |
|   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |
|   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |
|
|
|
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|   |
|   |   |
|
|
|   |
|   |   |   |   |   |
|   |
|   |   |
Template Sequence |   |
G | D | I | Q | T | Q | P | G | T | K | I | V | F | N | A | P | Y | D | D | K | H | T | Y | H | I | K | V | I | N | S | S | A | R | R | I | G | Y | G | I | K | T | T | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | K | R | L | G | V | D | P | P | C | G | V | L | D | P | K | E | A | V | L | L | A | V | S | C |
Template Known Secondary structure |   |
|
|  |  |  |  | S | S | S |
|  |  |  |  | S |
|
| S | S |
|  |  |  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  | S |
| . | . | . | . | . | . | . | . | . | . | . | . | T | T | T |  |  |  |  | S | S |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
  |
  |   |
102 | . | . | . | . | . | . | . | 110 | . | |
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | E | S | D | I | L | P | V | D | R | . |
E | T | L | F | E | L | S | I | A | S | V | P | S | G | K | V | E | . |
. |
. |
. |
. |
. |
N | Q | S | V | K | V | A | M | R | S | V | F | K | L | F | W | R | P |
Query Conservation |   |
  |   |   |   |   |
|
|   |
|   | . |
|
|   |
|   |
|   |
|   |   |
|
|   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |
|
Template Sequence |   |
D | A | F | A | F | G | Q | E | D | T | N | N | D | R | I | T | V | E | W | T | N | T | P | D | G | A | A | K | Q | F | R | R | E | W | F | Q | G | D | G | M | V | R | R | K | N | L | P | I | E | Y | N | P |
Template Known Secondary structure |   |
|
|
|
| G | G | G | S |
|
| T | T |
|  |  |  |  |  |  |  |  |
|
| S | S |
|
| S | S |
|
| G | G | G | G | T | S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|