Job Description P40876 Confidence 52.70% Date Thu Jan 5 12:01:18 GMT 2012 Rank 45 Aligned Residues 87 % Identity 10% Template c3h6aB_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-4; PDBTitle: structure of the calx-beta domain of integrin beta42 crystallized in the presence of calcium Resolution 1.61 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		V	V	V	G	G	T	R	F	I	F	P	A	D	R	E	S	I	S	I	L	L	T	N	T	S	.	.	Q	E	S	W	L	I	N	S	K	I	N	R	P	T	R	W	A	G	G	E	A	S	T	V	P	A	P	L	L	A	A	P	P	L	I	L	L	K	P	G	T	T	G	T	L	R	L	L	R	T	E	S	D
Query Conservation																											.	.
Alig confidence																											.	.																					.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.
Template Sequence		V	S	F	E	Q	P	E	F	S	V	S	R	G	D	Q	V	A	R	I	P	V	I	R	R	V	L	D	G	G	K	S	Q	V	S	Y	R	T	Q	D	G	T	A	Q	G	N	R	D	.	.	.	.	.	.	.	Y	I	P	V	E	G	E	L	L	F	Q	P	G	E	A	W	K	E	L	Q	V	K	L	L	E	L
Template Known Secondary structure					S		S						T	T		S										S			S	S											S	S	S		B	T	T	T	.	.	.	.	.	.	.	B											T	T										B
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.
Template SS confidence
		992	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.								.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	P	V	D	R	E	T	L	F	E	L	S	I	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	R	G	R	Q	V	R	R	F	H	V	Q	L	S	N
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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